| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_3121 |
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| Symbol | valS |
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| ID | 5370907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3718029 |
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| End bp | 3720905 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640831367 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001367315 |
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| Protein GI | 153001634 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000565477 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAA CATACGATCC GCAGTCCATC GAGCAAACTC TTTACCAAAA CTGGGAAGAG
CAAGGTTACT TCAAGCCACA CGGTGATGAA TCCCAAGGCA ATTATTGCAT CATGATCCCG
CCACCAAACG TGACGGGCAG CTTGCACATG GGCCACGCCT TCCAAGACAC CATTATGGAT
ACTTTGACCC GTTACCAACG GATGAAAGGC AAAAATACCC TATGGCAAGT CGGTACTGAC
CATGCGGGTA TCGCCACCCA AATGTTGGTT GAGCGTAAGC TTGAAGCCGA AGAAGGCAAA
AATCGCCATG ACCTAGGTCG CGATGCCTTT ATGGATAAAG TGTGGGAATG GAAAGCGCAA
TCGGGCGGCA CTATCACTAA GCAGCTACGT CGTATGGGCG CTTCTGTTGA TTGGGACCGC
GAGCGTTTCA CTATGGACGA AGGCTTATCT AAGGCCGTTC AAGAAGTGTT TGTACGTCTG
TACGAAGACG AGTTGATTTA TCGCGGTAAG CGTTTGGTCA ACTGGGATCC AAAGCTGCAC
ACGGCTATCT CTGATTTAGA AGTGGAAAGC AAAGAAAAAC AGGGCCACAT GTGGCATCTG
CGTTATCCAC TGGCCGACGG TGAACTGACG GCCGATGGTA AAGACTATTT AGAAGTCGCT
ACCACGCGTC CAGAAACTAT GCTAGGCGAC AGTGCGGTTG CAGTGCATCC CGATGATGAA
CGCTATCAAG CGCTAGTCGG TAAGTTTATT CTATTGCCGA TTGTTAACCG CCGCATTCCT
ATCGTGGCCG ACGATTACGT CGACATGGCC TTTGGTACAG GGTGTGTGAA GATCACCCCT
GCCCATGACT TTAACGACTA TGAAGTCGGT AAACGTCACA ACCTGCCAAT GTTCAACGTA
CTGACCTTAG ATGCCGCCAT TCGTGCAAGT GCCGAAGTGG TGAACTCTGA CGGTACCTTT
AACAAAACGC TCGATGGCAG CCTGCCTGAA CGTTTTGCCG GACTTGACCG TTTTAAAGCG
CGCGATGCTA TCGTCGCTGA ATTTGACACC TTAGGTCTGC TCGAAAAAAT CGCGCCTCAT
GCTTTGAAAG TGCCTTACGG CGATCGATCC GGTGTGGTTA TCGAGCCGAT GCTGACCGAC
CAATGGTATG TGGCTGTTGC GCCAATGGCG AAAACTGCTA TCGAAGCCGT TGAAAATGGC
AGTATCAAAT TTGTGCCGCA GCAATACGAG AACATGTACT TCTCGTGGAT GCGTGACATT
CAAGATTGGT GTATTTCGCG TCAATTGTGG TGGGGTCACC GCATCCCAGC ATGGTACGAC
GAAAACGGTA AAGTCTATGT CGGCCGCAAC GAAGCCGCTG TCCGTGCTAA GCACAATATC
GCCGACTCAA TGACACTGCG CCAAGACGAA GACGTACTGG ACACTTGGTT CAGCTCAGCC
CTGTGGACGT TCTCAACCTT AGGTTGGCCT GACAATTTAG AAGATTTAAA AACCTTCCAC
CCAACCGACG TGTTGGTGAC CGGTTTTGAC ATCATCTTCT TCTGGGTTGC CCGTATGATC
ATGATGACCA TGCACTTCAT CAAAGATGAA GACGGCAAGC CACAAGTCCC GTTCAAAACT
GTCTACGTGA CCGGCCTTAT CCGCGATGAA GCGGGTAACA AGATGTCAAA ATCTAAGGGT
AACGTACTCG ATCCATTAGA TATGATCGAC GGTATCGGAC TTGAAGATTT AGTTGAAAAA
CGTACCGGCA ACATGATGCA GCCACAACTG GCCGCCAAGA TTGAAAAGAG CACTCGCAAA
GAATTTGCCG ACGGTATCGA AGCCCACGGC ACAGATGCAC TGCGCTTTAC GCTTGCGGCA
ATGGCATCAA CGGGTCGTGA CATCAACTGG GACATGAAGC GCTTAGACGG TTACCGTAGC
TTCTGTAACA AGTTATGGAA CGCCTCACGC TACGTGCTGA TGAACACAGA AGATCAAGAT
TGCGGCCCAG GCTCACCAGA GCACAAAGGC GGCGAAATGG AACTGTCGTT GGCCGATCGC
TGGATTATTG GCTTGTTCAA TCAAACCGTT AAGACCTTTG ACGATCACAT GACAGCCTAC
CGTTTCGACT TAGCAGCCAA TACCCTGTAT GAGTTCACTT GGAACCAGTT CTGTGACTGG
TACTTAGAAT TAACTAAACC GGTATTGCAA AACGGCACTG AAGCACAAAT GCGCGGCACC
CGTCACACCT TAGTGACAGT GCTCGAAGCG ATGCAACGCC TGATGCACCC TATGATGCCG
TATATCACTG AAACCATCTG GCAGCGCGTT AAACCGTTAG CTGGTGTCGC TGGTGATACC
ATCATGCTGG CACCGTTCCC AACATTTGAT GCCGCTAAAG TCGATAGCGC AGCAATGGCC
GATTTAGAAT GGGTTAAGCA AGTGATTGTC GCCGTGCGTA ACATTCGCGC CGAACTGAAC
ATTGCCCCAT CTAAGCCGTT AAATGCCCTA CTTCGTGGTG TTAGCGTGCA GGACAAAGCC
CGTGTTGAAG CCAACCAAAC CTTCTTCACC ACACTTGCCC GCTTAGAAAG CATGACCATT
TTAGCCGATG GCGAAACTGC GCCTATGTCG ACCACAGGTT TGATTGGCGA AATGGAACTG
CTGATCCCTA TGGCAGGCTT GATCGATGTC GCCGCCGAAA TGGCCCGTAT CGACAAACAG
CTTGAAAAGC TCCGCCAAGA GATCGCTCGC ATCGAAGGCA AATTGTCGAA CCAAGGTTTT
GTGGCAAAAG CTCCAGCCGA GGTTATCGAC AAAGAGCGCG CTAAGATGAC CGATCTCAAG
CGTGACATGG ACAAGCTCAA CGAACAAAAA TCAGAGTTCG CTAAGTTAGA AGCTTAA
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| Protein sequence | MEKTYDPQSI EQTLYQNWEE QGYFKPHGDE SQGNYCIMIP PPNVTGSLHM GHAFQDTIMD
TLTRYQRMKG KNTLWQVGTD HAGIATQMLV ERKLEAEEGK NRHDLGRDAF MDKVWEWKAQ
SGGTITKQLR RMGASVDWDR ERFTMDEGLS KAVQEVFVRL YEDELIYRGK RLVNWDPKLH
TAISDLEVES KEKQGHMWHL RYPLADGELT ADGKDYLEVA TTRPETMLGD SAVAVHPDDE
RYQALVGKFI LLPIVNRRIP IVADDYVDMA FGTGCVKITP AHDFNDYEVG KRHNLPMFNV
LTLDAAIRAS AEVVNSDGTF NKTLDGSLPE RFAGLDRFKA RDAIVAEFDT LGLLEKIAPH
ALKVPYGDRS GVVIEPMLTD QWYVAVAPMA KTAIEAVENG SIKFVPQQYE NMYFSWMRDI
QDWCISRQLW WGHRIPAWYD ENGKVYVGRN EAAVRAKHNI ADSMTLRQDE DVLDTWFSSA
LWTFSTLGWP DNLEDLKTFH PTDVLVTGFD IIFFWVARMI MMTMHFIKDE DGKPQVPFKT
VYVTGLIRDE AGNKMSKSKG NVLDPLDMID GIGLEDLVEK RTGNMMQPQL AAKIEKSTRK
EFADGIEAHG TDALRFTLAA MASTGRDINW DMKRLDGYRS FCNKLWNASR YVLMNTEDQD
CGPGSPEHKG GEMELSLADR WIIGLFNQTV KTFDDHMTAY RFDLAANTLY EFTWNQFCDW
YLELTKPVLQ NGTEAQMRGT RHTLVTVLEA MQRLMHPMMP YITETIWQRV KPLAGVAGDT
IMLAPFPTFD AAKVDSAAMA DLEWVKQVIV AVRNIRAELN IAPSKPLNAL LRGVSVQDKA
RVEANQTFFT TLARLESMTI LADGETAPMS TTGLIGEMEL LIPMAGLIDV AAEMARIDKQ
LEKLRQEIAR IEGKLSNQGF VAKAPAEVID KERAKMTDLK RDMDKLNEQK SEFAKLEA
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