Gene Shew185_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3120 
Symbol 
ID5373196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3717484 
End bp3718008 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content48% 
IMG OID640831366 
ProductDNA polymerase III chi subunit HolC 
Protein accessionYP_001367314 
Protein GI153001633 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.77435e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGCAAG GCATTGAAAT CATGACTCAA GTGCTGTTTT ATCTCATGCC GCCAGTGGCA 
TCAATTGCCA AAGCTAAGGC TGATTCACCT GTTGCAACCG CGAATGCGAC CCCTGCGCTT
TGCGAGATGC ATCTTCTGGC ATGTCAACTG GCGCAGCAGG CTTTTGTGAA GCAACAATGG
GTCTATATCC ATTGCCAAGA TAAGCAGCAA GCCCATGCGA TTGATGAACT TTTATGGCAG
TTTGAACCAA GTGCCTTTGT ACCTCATAAC CTCAAAGGTG AAGGCCCGAT GACGGGTTCG
CCGGTAGAAA TTGGTTTTGA TCGCCTCGGC GCCAACAAAA GTCGCCAAGT TCTGATTAAT
CTTGCAGACC AAGCGCCCCC ATTTGCGGTA AACTTTGGCC ACATTATCGA TTTTGTTGCC
AATGACGATC AGCATAAAGC GGTCGCTCGC GAACGTTATC GACAGTATCG CGGCTTAGGG
GTCAATTTAC AGACCCAAGA CTTAGCAACA CATCCACTTA ATTAG
 
Protein sequence
MKQGIEIMTQ VLFYLMPPVA SIAKAKADSP VATANATPAL CEMHLLACQL AQQAFVKQQW 
VYIHCQDKQQ AHAIDELLWQ FEPSAFVPHN LKGEGPMTGS PVEIGFDRLG ANKSRQVLIN
LADQAPPFAV NFGHIIDFVA NDDQHKAVAR ERYRQYRGLG VNLQTQDLAT HPLN