Gene Shew185_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3118 
Symbol 
ID5372286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3714298 
End bp3715410 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content50% 
IMG OID640831364 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001367312 
Protein GI153001631 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.10304e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTGTAT TTAAATACCT TATTCGAGAA GTTTTAAAGG CACAAATTGC GGTACTTTTA 
GTGCTGTTAA CTATTTTTAT TAGCCAGCAT TTCGTGCGTA TACTGGCCGA TGCCTCCGAC
GGCGATTTTC CCGCCTCTTT AATCATGACC CTGATAGGGC TTAACTTGCC ATATCTGGTG
ATCTTAGTCC TGCCGTTAAG TTTGTTCTTG GGGATTTTAC TGGCCCACGG CCGTATGTAT
TCCGAAAATG AGATGGTCGT TCTCCACGGT GTTGGGGTCA GTGAGTGGTA TGTTACCCGC
GTGACGCTGA TTCTTGCCGT GATCAATATG TTGTTTACCG GCTATTTATC CCTTTATGTC
GCCCCTTGGG CAGAAGAGCA GCAAAACCAA GTGCTCGAAA AAGCCCAGTC CGAAGCCGGG
CTTGCGGCCT TAGTACAAGG GCGTTTTCAG GCGAGCCCGA ATGGTCGCGC GGTATTATTT
GTCGAACGTA TCGGTAAAGA TAACGAGTTA GATAAAGTGT TTGTGGCCCA GTTGCCAGAC
CCTGATGACG AAACCGGCGT CACCAATGTG GTGGTGGCCA AGGGTGGGCG AGTGCAGGAA
GATAGTACTG GCGCACAGCA ATTAAATCTC AATGATGGCG TGCGTTATCA AGGCAGCCCG
AAGGCGAAGG ACTACCAAAT GATCGAATTT GGTGGTTATA AAATGCAAAT TAAAGAGCAG
CAAGTCGACG AGCGTCGGCG TAAGTTATCT GCGCTGCCCG TCGATGAGCT AGTCAAAATC
GAAGGCGCGG AAGCCGTTGC CGAATTCCAT TGGCGTCTTG CCATTCCGCT GGCGATTCCA
ATCATGACCT TGATTGCGGT GCCTCTGGCG CGGGTGAATG TGCGTCAGGG TAAGTTTGCT
AAAATGTTCC CTGCAGTACT CTTGTACCTT GGCTATTTTG GCCTCATGGT CGCCGGACGT
AAGGCATTGC AAGATGGGAT TATTCCACTG TATTTAGGCA TGTGGTGGAT CCATATTTCG
GCGCTCTTGA TGGGGCTGCT CTTGCTCGGC AAAGATAGGC CTATATTTAG TCGTATCTCG
ACCCTGTTTG CCCATAAGAA GGTGGCGGCA TGA
 
Protein sequence
MIVFKYLIRE VLKAQIAVLL VLLTIFISQH FVRILADASD GDFPASLIMT LIGLNLPYLV 
ILVLPLSLFL GILLAHGRMY SENEMVVLHG VGVSEWYVTR VTLILAVINM LFTGYLSLYV
APWAEEQQNQ VLEKAQSEAG LAALVQGRFQ ASPNGRAVLF VERIGKDNEL DKVFVAQLPD
PDDETGVTNV VVAKGGRVQE DSTGAQQLNL NDGVRYQGSP KAKDYQMIEF GGYKMQIKEQ
QVDERRRKLS ALPVDELVKI EGAEAVAEFH WRLAIPLAIP IMTLIAVPLA RVNVRQGKFA
KMFPAVLLYL GYFGLMVAGR KALQDGIIPL YLGMWWIHIS ALLMGLLLLG KDRPIFSRIS
TLFAHKKVAA