Gene Shew185_3056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3056 
Symbol 
ID5371612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3648420 
End bp3648971 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content45% 
IMG OID640831298 
Productcytochrome B561 
Protein accessionYP_001367250 
Protein GI153001569 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000111673 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCGAA ATAGTAAGTT GGCTTATGGG ATAACCGCAA TTGTGACTCA TTGGCTGAGT 
GCGATCGTCG TCATTGGGTT GTTTGCGGTA GGTGTGTGGA TGGTGGAGTT AACCTACTAC
AGCGCGTGGT ACAAGACAGC GCCACATCTA CATAAGAGCG TCGGGATTTT ACTCTTGGCA
GTGACGTTAT TCCGCTTGTT GTGGCGCTTA GTGAATCCTA AGCCCGTACC AGAGGCGAAT
CATAAGCCTT GGGAGAGGCA GGTGGCTCAT ATTGCGCATT TAGCTATTTA TGTATTGCTG
CTGGTGATCA TGTGTGCCGG CATTCTTATT TCAACGGCAG AAGGCCGTGG AATTATGGTG
TTTGACTGGT TTGAACTACC AGGATTTGGA CCTTTTTTTG AAAACCAAGC TGATATAGCA
GGCGATATCC ACCAATACGC AGCTTATAGC TTAATTGCAC TCGTGGTAAT CCACGCAGCA
GGTGCGTTAA AGCATCACTT TATCGATAAA GACGCAACTT TACTCAAAAT GATTAAATTT
AATCGAGGAT AA
 
Protein sequence
MFRNSKLAYG ITAIVTHWLS AIVVIGLFAV GVWMVELTYY SAWYKTAPHL HKSVGILLLA 
VTLFRLLWRL VNPKPVPEAN HKPWERQVAH IAHLAIYVLL LVIMCAGILI STAEGRGIMV
FDWFELPGFG PFFENQADIA GDIHQYAAYS LIALVVIHAA GALKHHFIDK DATLLKMIKF
NRG