Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3045 |
Symbol | |
ID | 5372894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3637315 |
End bp | 3637932 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640831287 |
Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
Protein accession | YP_001367239 |
Protein GI | 153001558 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000716633 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAA TCGTCCTCGC CAGTGGCAAC AAAGGCAAAC TCGCCGAATT CGATCAAATG CTCGCCAGCT ACGGTGTCAC TGTACTGCCG CAGAGCCAAT TTAATGTCAG CGAAGTGGCC GAAACGGGCA CCACTTTTGT CGAAAATGCT ATTATCAAAG CCAGACATGC AGCCGAAATC ACCGGACTTG CCGCCATTGC CGATGATTCA GGTTTAGAAG TGGATTTACT CCAAGGCGCT CCCGGCATTT ATTCAGCGCG TTACGCGGGC GAAAATGCCA AAGATCAAGA CAACGTATTG AAACTACTTG AGACAATAAA AGACCAGCCA GCACCTCGCA GTGCGAGATT CCAATGCGTA CTGGTGTATA TGCGCCACGC CAAAGATCCA ACCCCAATTA TTTGCCAAGC TGCATGGGAA GGCCAAATCG ACTTTAACCA ACGTGGCGAC AATGGCCATG GTTACGATCC GATTTTTATC CCTGAAAATT ATCAATGTAG CGCGGCGGAG CTCAGCAGCA ACGAGAAAAA TGCCTTAAGC CATCGTGGTA AAGCCCTAGT GCAACTCATC GCCGCCATGC AAGCCCAAGG CGTGTTAACT GGCGGGAATG CACAATAA
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Protein sequence | MQQIVLASGN KGKLAEFDQM LASYGVTVLP QSQFNVSEVA ETGTTFVENA IIKARHAAEI TGLAAIADDS GLEVDLLQGA PGIYSARYAG ENAKDQDNVL KLLETIKDQP APRSARFQCV LVYMRHAKDP TPIICQAAWE GQIDFNQRGD NGHGYDPIFI PENYQCSAAE LSSNEKNALS HRGKALVQLI AAMQAQGVLT GGNAQ
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