Gene Shew185_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3045 
Symbol 
ID5372894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3637315 
End bp3637932 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content50% 
IMG OID640831287 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001367239 
Protein GI153001558 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000716633 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACAAA TCGTCCTCGC CAGTGGCAAC AAAGGCAAAC TCGCCGAATT CGATCAAATG 
CTCGCCAGCT ACGGTGTCAC TGTACTGCCG CAGAGCCAAT TTAATGTCAG CGAAGTGGCC
GAAACGGGCA CCACTTTTGT CGAAAATGCT ATTATCAAAG CCAGACATGC AGCCGAAATC
ACCGGACTTG CCGCCATTGC CGATGATTCA GGTTTAGAAG TGGATTTACT CCAAGGCGCT
CCCGGCATTT ATTCAGCGCG TTACGCGGGC GAAAATGCCA AAGATCAAGA CAACGTATTG
AAACTACTTG AGACAATAAA AGACCAGCCA GCACCTCGCA GTGCGAGATT CCAATGCGTA
CTGGTGTATA TGCGCCACGC CAAAGATCCA ACCCCAATTA TTTGCCAAGC TGCATGGGAA
GGCCAAATCG ACTTTAACCA ACGTGGCGAC AATGGCCATG GTTACGATCC GATTTTTATC
CCTGAAAATT ATCAATGTAG CGCGGCGGAG CTCAGCAGCA ACGAGAAAAA TGCCTTAAGC
CATCGTGGTA AAGCCCTAGT GCAACTCATC GCCGCCATGC AAGCCCAAGG CGTGTTAACT
GGCGGGAATG CACAATAA
 
Protein sequence
MQQIVLASGN KGKLAEFDQM LASYGVTVLP QSQFNVSEVA ETGTTFVENA IIKARHAAEI 
TGLAAIADDS GLEVDLLQGA PGIYSARYAG ENAKDQDNVL KLLETIKDQP APRSARFQCV
LVYMRHAKDP TPIICQAAWE GQIDFNQRGD NGHGYDPIFI PENYQCSAAE LSSNEKNALS
HRGKALVQLI AAMQAQGVLT GGNAQ