Gene Shew185_3042 details

Gene Information

• Locus tag: Shew185_3042
• ID: 5370302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3635762
• End bp: 3636310
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640831284
• Product: protein of unknown function YGGT
• Protein accession: YP_001367236
• Protein GI: 153001555

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000000245532
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGCAT TTACCTTTTT AATCACCACA CTATTCGACT TATATTTGAT GGTGGTGATT 
TTGCGGATTT GGCTGCAACT GGCAAGGGCG GATTTTTACA ATCCTTTTAG CCAATTTATT 
GTCAAAGCGA CTCACCCGCT CATCGCGCCA ATGCGCCGTA TTCTGCCTTC CTTAGGACGG 
TTTGATACCG CATCATTCGT CCTCGCGTTG CTGGTCGTGA TGGTCAAAGT ACTGCTGATC 
AGCCTTATCG CGGGCGGTGG CATAGACATA CTGCTGTTTT TGATGTTTGC CGTCGTATCT 
GTGATCAAAA AAGCAGGGGT CTTGCTGTTT TGGATGCTGT TGATACGCGC AATATTGAGC 
TGGTTTAACC AAGGCTATAA CCCAATAGTG ATGGTCATGG GCCAGTTAAC TGAACCCGTA 
TTAGCGCCAA TCCGCCGTAT CATACCGCCA ATTGGTGGCT TAGATTTATC GGTAATGTTG 
GTGATTATTG GTATGAATTT CCTCAATATG TTACTTGCCC AATATATCCC TTATTGGGCT 
GTGATCTAA 

 

Protein sequence

MNAFTFLITT LFDLYLMVVI LRIWLQLARA DFYNPFSQFI VKATHPLIAP MRRILPSLGR 
FDTASFVLAL LVVMVKVLLI SLIAGGGIDI LLFLMFAVVS VIKKAGVLLF WMLLIRAILS 
WFNQGYNPIV MVMGQLTEPV LAPIRRIIPP IGGLDLSVML VIIGMNFLNM LLAQYIPYWA 
VI