Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_3040 |
Symbol | |
ID | 5373714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 3633981 |
End bp | 3634679 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640831282 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001367234 |
Protein GI | 153001553 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0000913695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACAA TAGCAGACAG ACTCGCAATC GCCCAGCGCA GGATCGCACA AGCGGCGCAA AAATGTGCCC GCCAACCTAG CAGTATTAGC TTACTTGCCG TCAGCAAGAC CAAACCTATT GAAGACATTA TAGCAGCCTA TCAAGCGGGT CAGCGTTGCT TTGGCGAAAA CTATGTCCAA GAAGGTGCGG AGAAAATTAT CGCACTCAAG GGGGATTTTC CGGACATTGA ATGGCACTTT ATCGGGCCAC TCCAATCCAA CAAAACCAGC ATAGTCGCCC AGCATTTCGA TTGGATGCAC ACTGTCTCGC GCGACAAAAT TGCCCAACGT CTCAATGACC AACGTCCAGC TGAATTAGCG CCATTAAACA TCTGCATTCA AATTAATATC AGTGCTGAAG ACACAAAATC TGGCATAGAT GCGGCGCAAA TGCTGCCACT GGCAGAGCTT ATCGCTCAGT TACCTAATCT TGCACTGAGA GGCCTAATGG CAATCCCAAC GGCTACTGCA GATACTGAGT TACAGCTTAA AGAGTTTTCT ATGTTAAACA ATCTATTTCA AGAACTTAAA TCACATTACC CCAATGTAGA CACGCTTTCC ATGGGGATGA GTAATGACCT AGATGCAGCG ATTAGCTGCG GTTCAACTAT GGTGCGTATT GGCAGTGCCA TTTTTGGTGA GCGCAATTAC GCTGCGTAA
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Protein sequence | MTTIADRLAI AQRRIAQAAQ KCARQPSSIS LLAVSKTKPI EDIIAAYQAG QRCFGENYVQ EGAEKIIALK GDFPDIEWHF IGPLQSNKTS IVAQHFDWMH TVSRDKIAQR LNDQRPAELA PLNICIQINI SAEDTKSGID AAQMLPLAEL IAQLPNLALR GLMAIPTATA DTELQLKEFS MLNNLFQELK SHYPNVDTLS MGMSNDLDAA ISCGSTMVRI GSAIFGERNY AA
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