Gene Shew185_3033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3033 
Symbol 
ID5372463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3628501 
End bp3628839 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content44% 
IMG OID640831275 
Producttranslation initiation factor Sui1 
Protein accessionYP_001367227 
Protein GI153001546 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0023] Translation initiation factor 1 (eIF-1/SUI1) and related proteins 
TIGRFAM ID[TIGR01158] translation initation factor SUI1, putative, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000199492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTA TGAAAGCAGA TCCTAATGTA TCCTTAGTGT ACAGCACCGA CAAAGGCCGT 
ATTAATGCAG AGCCCGTCAC TAAAGCGATT CCTGAATCCG ACGGTATAGT CAGGATCCAT
AGAGACAGTA AGGGCCGCAA AGGCAAAGGC GTTTCGATTA TCTCAGGCCT AGGTCTCGAT
GAAACCGCGT TAAAAGCAAT GGCTCAGACC CTTAAAAAAC AATGTGGTTG TGGTGGAACG
GTTAAAGATT TCACTATTGA GGTCCAAACC GATAACCGCG AGCAATTAAA GCTATTGCTT
GAGAAGCAGA ACTACAAAGT TAAATTAGCT GGCGGTTAA
 
Protein sequence
MKSMKADPNV SLVYSTDKGR INAEPVTKAI PESDGIVRIH RDSKGRKGKG VSIISGLGLD 
ETALKAMAQT LKKQCGCGGT VKDFTIEVQT DNREQLKLLL EKQNYKVKLA GG