Gene Shew185_3026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_3026 
Symbol 
ID5370530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3622669 
End bp3623682 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content49% 
IMG OID640831268 
Productthreonine aldolase 
Protein accessionYP_001367220 
Protein GI153001539 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000104832 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGATT TACGCAGTGA TACTGTTACC CAGCCAACAG CAGCGATGCG ATTAGCCATG 
TCCAGAGCCG AAGTAGGTGA CGATGTTTAC GGTGATGATC CCACGGTAAA TAGTCTGCAG
GATATGGCCG CAGAGATGTT TGGCTTTGAA AGCGCATTAT TTACCTGTTC AGGTACGCAG
GCGAATTTAT TGGCTTTGAT GGCCCACTGT GAGCGTGGTG ATGAGTATCT GTGTGGCCAG
CAGGCCCACA ATTATAAATT TGAGGGTGGC GGAGCCGCCG TCTTAGGCAG CATTCAACCC
CAACCTTTGT TGAATCAAGT CGATGGCACC ATTGCCTTGG CCGATATTGA AGCCGCCATT
AAGCCTGACG ATATCCACTT TGCCCGCACA CGTTTGCTCA GTTTAGAGAA TACAATTGGC
GGTAAAGTGA TTCCGCAAAG CTATTTAGCG GACGCGCAGG CATTGGCCTT TAATCGCGGA
TTAAAAATCC ATCTCGACGG CGCGCGAGTT GCTAATGCGG CTGTGGCGCA GAATATCGCG
ATAAGTGAGA TTACGGCGCA TTTTGATTCT GTGTCAATTT GTCTGTCCAA AGGGTTATGC
GCGCCAGTTG GCTCATTACT CTTAGGTGAC GAGCGTTTGA TTAAGAAGGC GATACGCTGG
CGTAAAATGC TCGGTGGCGG CATGCGTCAA GCTGGGATAC TTGCTGCGGC AGGTAAGCTC
GCCTTAACTG AGCAAGTGCA ACGACTGAGT GAAGATCATG ACAACGCGGC GTATTTGGCT
CGCCAGTTGG CAGAGTTGAG TGAGTTCGAC GTCGATTTAG CCGCAGTACA AACCAATATG
TTATTTGCCA AATTAGCGCC TAAAGTTGAT GCGGATTTAT TGGCAAAACA CTGTCGAGCT
GAAGGCATTC TGATAAGCCC TGGGCGCACG ATTCGGCTTG TGACTCACAA AGATGTGAGC
CGTCAGGACA TAGATAAAGT GTTGCGGGTT ATGAAGCAGT ACTTCACTGC CTAA
 
Protein sequence
MIDLRSDTVT QPTAAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTCSGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLLNQVDGT IALADIEAAI
KPDDIHFART RLLSLENTIG GKVIPQSYLA DAQALAFNRG LKIHLDGARV ANAAVAQNIA
ISEITAHFDS VSICLSKGLC APVGSLLLGD ERLIKKAIRW RKMLGGGMRQ AGILAAAGKL
ALTEQVQRLS EDHDNAAYLA RQLAELSEFD VDLAAVQTNM LFAKLAPKVD ADLLAKHCRA
EGILISPGRT IRLVTHKDVS RQDIDKVLRV MKQYFTA