| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2980 |
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| Symbol | |
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| ID | 5371352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3562289 |
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| End bp | 3564769 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640831222 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001367174 |
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| Protein GI | 153001493 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2604] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.376488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCT CTGAAGGAAA ATTAGATTTC TCAACTAATG CTTTTGGTGA GAGATATTTA
TATCCTGTCA ATCAAATCAG TTTTGACCGG TACGATTCAC ACAGTGTTTT CAAGGCACAC
TATCATGAAG CATTATGGGG CGATGATACA TTTAATGTCA TTATTGGGAC TGACTCTGGA
TTGCTGGTTG ATTATGTTAG GCAACACCGT AAGCAAGATA ATTCAGTGTA TATATTTGTT
GAATTACAGT CTTTGGTGGG AGCTGTTAAC ACAAACTGCT TTATTGAAGA AGATTCCAAT
ATTTACATCT ATGGATCCGA TGAGTGGGAA TCGGCGGTAA AGCGTTCGGA AATAGCGCAA
TTCATCTATA AAAATAAATT ACGTTTTTTT GACTCATTAG GCGCTAGATA TGAATACTTG
GATGATTATC ATGCGCTAAA GTTTAAAGTG CATGCCAGTT TAGAGCAGCT TTCCTATTTA
AATCGCGTTA CGCTAGGTAG TGAAAACTTT ATCGTGCGCC AGCTACAAAA TATCTCTGAA
AATTATCTTT CCGCGATGCC GCTCAAAGAT GTATTTTCAG GGTGCACGGC CATTATTCTA
GCTGGTGGTC CATCATTAGA TGAGGTACTT CCTTGGGTCA TTGAGTATCG CGAACGACTG
GTCGTTATCG CGGTATCAAG GATTGCCAAA CGCCTACGAG AAGTTGATTT AATCCCTGAT
GTGTTTGTAT CAGTCGATCC TTTCGATGAT AGTTTTGATG TCAGCAAGGA GATGTTGGAG
TTTCCGCCTT CCGTCGTATT TGTAAATTCA TATCATGTTG TTTCAAAGTT ATTAGCGCAG
TGGCGGGGGC CAAATCTTTA TCTTGGTTTA CGTTTCCCAT GGAAAACACC CAATAATGGT
GAAAACTTTT ATTCAGCAGG GCCAACAGTG ACCAATTCTG CTTTGTCATT TACGTTAGGA
ATTGGTTGCT CTAAAATTTT ATTTGCGGGT GTGGATCTGT GCTTTTCTAA GGAAGGTTAT
ACACATGCAA AAGGCAGTAT TGAAACAGCT CAAGGTCCTT TACTTACTGC TGATGGATTG
TGGGTCGAAA CCAATGCAAA TGAGATGGCT GAAACATCAT TTCCATTGGC CTCTGCCCGT
GAGCAATTTG AAATTATGAT TGCTGAACAG CCAGATGATA AATTCGAAAT TATCAATCTT
GCGTTGAATG CAGCCAAAAT AAAGGGTGTG AATTATCAAA ATATCAAGGA TGTTGAAATT
GTTGGTTTTC CTGATAGTGC CAAGCAAAAA ATGCATGATT ACTGCCATAG TTTTACCGAG
GAAAATAGAT ATCAAGATAG TAATATGGTC TTTAAAGAGC TGTCTAAGGT TCAAAATGAT
CTGAAGAAAA TAATATTACT CGCCAATGAA GGAATATTGG CTAATAAGAA GTTGTATGGC
AGTAAAGATC AACATCAAAA GGATCGCATT ACAGTTAAAT TAAATAAGAT CCAGAGCAAG
CTAGATAAAA ATTTTGCGTA TCTTGCACGG CTGCTTAAAA CCTATGGGCT TAGTTATTTT
GTGGAGTATA TGGATCCTAG TTCAATTGAC CATTGGGATG ATGCTAAGTT AGAAAAAAGC
GGTGACCTTT ATTATCAAGC GTATAAGAAA AGTGCAAAAA AACTGTTAAA GCTAATCGAT
GCGAGTATTG ATCGTGTGCT ATCTCGTAAA GAAGAAATGA AAATTCATCC AGATTTTGAA
TTGATTTTTT CCGCTTGGAT ACGAGATAAA CAGCTTGGGC GAGCTTATAT TTGGGCACAA
AAACATCCTT TAGCAGAACA GTCCCTTGCT ACTCAACAAA GCTTTGAGCG GGTATTTTCC
GAGTATCATG CCGTGATTAA TTCAAATGAC ACCGAGCATG CTCAATTTAT CGCAAAAAGA
GCCAGTGTTG ATGGGGTTGA GCATAAGGCT ACGCAGCTTT TCGCAAAACG AGATTTAAAT
GGGTTGAAGA AGCTTGCACT TAGTTTATCG TTACAGCCTC AGAATGATGT GGCTAAAGAC
TCTTTAGCTC ATCTGTTATC TGGTTATATT TATGTGCTGT TAGATGATAA TAATGAAGCA
CTAGCTCATT TTCAGCAAAC TAATGTCGAT AGTCATCGTA TGTATGCGCT TAATCATATT
GTGGGAATAG AGCTTGGGGA AAAGCGCTTC GCTGAGGCCA TCGTCGGTTT AAGAGAGTTA
TGTGCATTCT CTCCGAGATA CTTTATTAAG TTAGCGCATT TGCAGTATCT AACCGATGAG
CCAATGGCTG CTATCGATGC TTATAACCAG TATTTGACTC TTTTCGGAGA TGATACCCAA
GCGTGGATGG CGTTAGCGAA AATTTTCTTT GAGCTAGGTG CGATAGAGTC TGCACAAATT
GCATGTGATT ATGTATTGGA TGTTGAGCCG CAAAATAAGC TAGCAGCAAC AATGCTACTG
CAGATTGGAA AATTAGCTTA G
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| Protein sequence | MTPSEGKLDF STNAFGERYL YPVNQISFDR YDSHSVFKAH YHEALWGDDT FNVIIGTDSG
LLVDYVRQHR KQDNSVYIFV ELQSLVGAVN TNCFIEEDSN IYIYGSDEWE SAVKRSEIAQ
FIYKNKLRFF DSLGARYEYL DDYHALKFKV HASLEQLSYL NRVTLGSENF IVRQLQNISE
NYLSAMPLKD VFSGCTAIIL AGGPSLDEVL PWVIEYRERL VVIAVSRIAK RLREVDLIPD
VFVSVDPFDD SFDVSKEMLE FPPSVVFVNS YHVVSKLLAQ WRGPNLYLGL RFPWKTPNNG
ENFYSAGPTV TNSALSFTLG IGCSKILFAG VDLCFSKEGY THAKGSIETA QGPLLTADGL
WVETNANEMA ETSFPLASAR EQFEIMIAEQ PDDKFEIINL ALNAAKIKGV NYQNIKDVEI
VGFPDSAKQK MHDYCHSFTE ENRYQDSNMV FKELSKVQND LKKIILLANE GILANKKLYG
SKDQHQKDRI TVKLNKIQSK LDKNFAYLAR LLKTYGLSYF VEYMDPSSID HWDDAKLEKS
GDLYYQAYKK SAKKLLKLID ASIDRVLSRK EEMKIHPDFE LIFSAWIRDK QLGRAYIWAQ
KHPLAEQSLA TQQSFERVFS EYHAVINSND TEHAQFIAKR ASVDGVEHKA TQLFAKRDLN
GLKKLALSLS LQPQNDVAKD SLAHLLSGYI YVLLDDNNEA LAHFQQTNVD SHRMYALNHI
VGIELGEKRF AEAIVGLREL CAFSPRYFIK LAHLQYLTDE PMAAIDAYNQ YLTLFGDDTQ
AWMALAKIFF ELGAIESAQI ACDYVLDVEP QNKLAATMLL QIGKLA
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