Gene Shew185_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2939 
Symbol 
ID5370866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3522662 
End bp3523744 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID640831183 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001367136 
Protein GI153001455 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.924574 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGCCA ACCCACTAGC GCAAATTGAG TCATTCAAGC ACACTAGCAA ACAATGGAAC 
CAACTGCGTG AGGCCGCTAA TATGTCCAAT CGAATGGAGC ATATTTTACA GGCTATGCCA
TCCGGCGTGG TGATTATCAA TGGCGACGGT ATAGTCACGG ATGCCAATCC GGTTGCAGTT
GAATTACTTG AGCGCTCCTT GTGTGGCGTT CGCTGGATTG ATGTGATCCA CAGTGCCTTT
GCGCCACAGG ATGATGATGG CCACGAAGTG TCACTGCGTA ATGGCCGCCG CGTTAAATTA
GCAATTACGC CACTCACGCC AGAGCCTGGT CAATTAATTG TGTTAACTGA TCTGACTGAA
ACTCGATTAT TACAGAAAAA TCTATCCCAT CTACAACGCT TATCTGCACT GGGTAAAATG
GTTGCGACCT TGGCACATCA AGTGCGCACG CCTTTATCTG CCGCTTTGCT ATATGCCTCT
AATCTTGCAA GTCCTAAGTT ATCCGATGCC GCTAAAGCAA AATTCCAGCA AAAGCTTGTT
GATAGACTCA ATGAACTGGA GCGTCAGGTT AACGACATGC TATTGATGGC GAAAGGCCGT
CAGGATGAAC TGGGAGATTT GATCACACTG GCTGAGGTTA TCGACAATGT ATTGGCAAAT
TGTGAGCCGA TAGCGGCGAA GCAAGGTTGT GACTTGTCAT TTGATGATGC ATCAAGCAGT
TCGATGTTAG CCAATTCAAA TGCTTTAAGC TCGGCAATCA ACAATTTAGT GATGAACAGT
ATCGAGGCTG GCGCCACTGA GATTCGTATT CAGGCGAAAG AAGAGGGCGA TCAGTTACTA
CTGAATGTCA TCGACAATGG CAAAGGTTTA GATGCCAATA TGCAGCAGAA GGTACTTGAA
CCTTTCTTTA CGACAAAATC GCAGGGAACT GGGCTCGGGT TAGCGGTTGT GCAATCTGTG
GTGCGTAATC ATGGAGGACA ACTGCAATTA AGTTGCTTAC CGAATAAAGG TTGCACTGTG
TCTTTAGTCT TCCCACGGGC TAAATCTGCG GTGATATTAC CTTTGGAGAT TACCCATGTC
TGA
 
Protein sequence
MSANPLAQIE SFKHTSKQWN QLREAANMSN RMEHILQAMP SGVVIINGDG IVTDANPVAV 
ELLERSLCGV RWIDVIHSAF APQDDDGHEV SLRNGRRVKL AITPLTPEPG QLIVLTDLTE
TRLLQKNLSH LQRLSALGKM VATLAHQVRT PLSAALLYAS NLASPKLSDA AKAKFQQKLV
DRLNELERQV NDMLLMAKGR QDELGDLITL AEVIDNVLAN CEPIAAKQGC DLSFDDASSS
SMLANSNALS SAINNLVMNS IEAGATEIRI QAKEEGDQLL LNVIDNGKGL DANMQQKVLE
PFFTTKSQGT GLGLAVVQSV VRNHGGQLQL SCLPNKGCTV SLVFPRAKSA VILPLEITHV