Gene Shew185_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2934 
SymbolfliH 
ID5371446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3516984 
End bp3518000 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID640831178 
Productflagellar assembly protein H 
Protein accessionYP_001367131 
Protein GI153001450 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1317] Flagellar biosynthesis/type III secretory pathway protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCCT CTAATCCGAG CGACAATAAA CCGTCAAATA AGGTCTTGAG CGACGGTGAT 
ATTGAGTTTA GTCACTGGGC ACTGCCAGAT GTGACTGAAG CCGATGACGA TTCTATCTCG
AATTTGTTCG GCCATTCGAA TCATCAAGCC GCTAAGCCGA CGACAGTTGA GAGTGTTTCT
CCGCCGACGA TGGCCGAGAT TGAAGACATT CGCGCCCAAG CCGAGGAAGA AGGGTTTGCC
GAAGGTAAAC AACAAGGTTA CGAGCAAGGG CTAGAAAAAG GTCGCTTAGA AGGCTTAGAG
CAAGGCCATA CCGAAGGTCT CGCCCAAGGG CATGAGCAAG GATTAGAAAC CGGTTTAGCT
CAAGCCAAGG TTTTACTTTC GCGGTTTGAA GCCTTATTAA CCCAATTTGA AAAGCCATTG
CAATTACTCG ATGGTGATAT TGAGCTCTCC CTACTGAACT TGAGTATGAC ATTAGCTAAA
TCAGTCATAG GTCACGAATT AAAAACCCAT CCAGAACAAG TGCTTTCGGT ATTACGCTTA
GGCATAGAGT CGCTACCGAT TAAAGAGCAA GCGGTTACTA TTCGGCTGCA TCCTGACGAT
GTGATCCTTG TCGAACAACT TTATTCCACC GCCCAACTGA CCCGCAGTAA ATGGGAACTT
GAAGTCGATC CGACGTTAAG TGCAGGCGAT TGTATTCTGA GCAGTCATCG CTCTTTAGTG
GATTTAACGC TTTCATCGCG TATCGATACT GTGTTTGAGT CATTACGAAA TCAACATGCG
CATTTGAGTG ATAAACAGCA TCAACTGCAA GAGACGATTG AAGCTGAAGA TACTGCCAAA
CAAGTTCCTG TGGCGCTTGA GTCTGAGCTT GATGATCAAA CGGTGGATGA CCAAGCTGTC
GATACGGTTA ACCAAGACGC TGAGGACATG CAATCTACCT CAAACACAGG TGAGCACTTA
GATACCCAAT CGGATGCCGG AACAGATGCA AAATCGCCAA CACCAACTGC TGAATAG
 
Protein sequence
MSSSNPSDNK PSNKVLSDGD IEFSHWALPD VTEADDDSIS NLFGHSNHQA AKPTTVESVS 
PPTMAEIEDI RAQAEEEGFA EGKQQGYEQG LEKGRLEGLE QGHTEGLAQG HEQGLETGLA
QAKVLLSRFE ALLTQFEKPL QLLDGDIELS LLNLSMTLAK SVIGHELKTH PEQVLSVLRL
GIESLPIKEQ AVTIRLHPDD VILVEQLYST AQLTRSKWEL EVDPTLSAGD CILSSHRSLV
DLTLSSRIDT VFESLRNQHA HLSDKQHQLQ ETIEAEDTAK QVPVALESEL DDQTVDDQAV
DTVNQDAEDM QSTSNTGEHL DTQSDAGTDA KSPTPTAE