| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2905 |
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| Symbol | |
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| ID | 5370179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3487072 |
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| End bp | 3488574 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640831149 |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_001367102 |
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| Protein GI | 153001421 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3104] Dipeptide/tripeptide permease |
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| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000347826 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAG CAAAACCACA AGGAACGATG CTTGGGCATC CTAAGGGATT GTTCCTGCTG
TTTACAACAG AACTTTGGGA ACGTTTTAGT TATTATGCAA TGCGCGCCAT TTTGGTGTTT
TATTTAACAG ATCAAGTAGC AAATCAAGGT GGAGGGTTAG GTTGGACATC CGCAGATGCT
CTTCGCCTAT ACGCATGGTT CACAGGACTT GTTTACCTCA CGCCTCTTCT CGGCGGTTGG
CTAGCAGATA ACTATCTAGG CCAACGCAAA GCTATTTACA TTGGTGGTAC CATGATGGCT
GCTGGTCAGT TTTTGCTGGC AACACCTCAT GCATGGATTT TAGGATTCGA GACAACTGTC
TTCTACTGTG GTTTGGCAAG CTTGATCTTG GGCAACGGCC TATTTAAACC TAACATTTCT
ACAATGGTAG GTGACTTATA TAATGAAGGC GACCACAGAC GAGATGGTGC CTTTACTGTT
TTTTATATGG GGATAAACGT TGGTGCAGCG CTTGCCGGTA TTTTAGTCGC AGAAGCTTAT
GAAGGTTTTG GTAGTATTCA AGTATTAGAC GGAAAAGAAA TCTTTGTTAA AAACTGGCAA
GCCGGATTTG TGTGCGCTGG TATAGGTATG CTCCTTTCAT TAGTTATTCA ATTCTTTTTC
GCACAGAAAC TATTAGGTAA TATTGGTAAA GAGCCTGCGG CAAAATTGGA ACGAGAGTTA
AACGAGAGAC GGGGACAAGT AAGAAGTGAG CCTCTTACCA AGGTCGAGCG AGATCGCATC
AAAGTCATTA TGATCATGGG CCTGTTTACA ATTATTTTCT GGGCTGGTTT TGAGCAAGCA
GGTGGCCTAA TGAACTTGTT CACAAACGAG TTTACAGACC GTATGATTGG TAGCTGGGAA
GTGCCAACGA CATATTTTCA GTCGCTAAAT GCAATATTCA TTGTGTTATT TGCCCCAGTT
GTGGCTTCGA TCTGGATAAG ATTAGGTAAT AGTGAACCAA ATTCGCCAGT AAAATTTGCT
CTCGGTCTAG TATTATTGGG AATAGGCTTC CTGTTCATGA TTGGTGCAGT CCTCGAGATG
GGCGGTGATG CATCAGCCAA ATCAAGTATG TGGTGGTTAG TGGGCGCTTA TTTCTTCCAC
ACTATGGGTG AACTTTGTTT ATCCCCAATT GGCTTATCTA TGGTGACTAA ACTTGCTCCA
CTGAGAATGA TCTCACTCTT AATGGGCGCT TGGTTTACAT TCATTTTTAT TGCGAATTTA
ACGGCTGGAT ACATAGGCTC ATTCATCGGC CATGGCGGTG AAAAGGAAGA GCAACTGGCA
AATGCAATGG CGATCTTCTC TGGCATTGCC ATCACAGCAG CTCTTTCAGG CATTATTCTG
TATTTTATGG CTGATAAATT AGTGGACTGG ATGCATGGCG CTGAAAGCAA GCATCAGACT
GAAGCTGAAA TATTAGAAAG TGAAATTGCT GTAACTGCTG AGCATGAAGC AATAAAACGC
TAA
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| Protein sequence | MSVAKPQGTM LGHPKGLFLL FTTELWERFS YYAMRAILVF YLTDQVANQG GGLGWTSADA
LRLYAWFTGL VYLTPLLGGW LADNYLGQRK AIYIGGTMMA AGQFLLATPH AWILGFETTV
FYCGLASLIL GNGLFKPNIS TMVGDLYNEG DHRRDGAFTV FYMGINVGAA LAGILVAEAY
EGFGSIQVLD GKEIFVKNWQ AGFVCAGIGM LLSLVIQFFF AQKLLGNIGK EPAAKLEREL
NERRGQVRSE PLTKVERDRI KVIMIMGLFT IIFWAGFEQA GGLMNLFTNE FTDRMIGSWE
VPTTYFQSLN AIFIVLFAPV VASIWIRLGN SEPNSPVKFA LGLVLLGIGF LFMIGAVLEM
GGDASAKSSM WWLVGAYFFH TMGELCLSPI GLSMVTKLAP LRMISLLMGA WFTFIFIANL
TAGYIGSFIG HGGEKEEQLA NAMAIFSGIA ITAALSGIIL YFMADKLVDW MHGAESKHQT
EAEILESEIA VTAEHEAIKR
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