| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2903 |
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| Symbol | |
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| ID | 5370177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3482869 |
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| End bp | 3485355 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640831147 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001367100 |
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| Protein GI | 153001419 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0690654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTACGAC AAGTCAAGAA ATTCATCATA CTAGGCATTA GTGCCGCGAT TTTGATGGGC
GCGCAGGCGA ATGCTATTAC GCCCTCTCCG CAGATGATCG AGCAGTTCAA AGCATTACCT
AAGTCTGAGC AAGAAAGATT AGCACGCCAA TATGGTGTAG ATCCTTCAAT GATAACCGGA
GCCGGAGCTA CAGCTACAGT TGTCGAGAAT CCGACTGTAG TTACCCCACG CGCTATGAAA
AATGACGTGG TTGACCAATC TGAAAGTGAA GAGCTAAATC AGGCGACGAA GTCAGAAGCT
AAAGTTGAGG CGATTGAAGG CAAAAAAGAA AATCAACTAA AGCGTTTTGG TTATGATCTG
TTCGCAGGCT CGCCGAGTAC TTTCGCGCCT GTAAGCGATG TGCCTGTGCC CGCTGAATAC
ATGATTGGAC CTGGTGATAG TTTAAATGTT CAGTTGTTTG GTAAAGAAAA TAACCAATAC
ACACTAACTG TGGGCCGTGA TGGTGCAATT CAGTTTCCTA ATTTAGGACC AATATCCCTT
ATTGGGTTGA GTTTTGCTGA AGTGCGAGAA TTATTGCAGC AAAAAATTAG CCAAAGCATG
ATTGGTATAG AATCAAATAT CACTATGGGC GAATTACGCT CAATCCGTAT TTTTGTTGCA
GGCGATGCAT ATCAACCTGG TTCTTACACT GTGTCGAGTT TATCAACAAT TACTCAAGCC
CTATTTGTTT CTGGTGGCGT CAATCAAATT GGTAGTTTAC GCGATATTCA AATTAAACGA
GCAGGAAAAA CTGTTGGCCG CCTAGATTTA TATGACTTAC TGCTACGCGG TGATGCATCT
GGTGACATAC GTTTACAATC GGGTGATGTA GTGTTCATTC CGTCTTCAGG TGGTTCTGTG
AGTGTGATGG GTGAAGTACG TCGTCCTGCA ATCTATGAGC TCAAAAATAA TGAAACAATG
GCTGATGTTA TTCGCATGGC GAGTGGCTTA AACCCTGGCG CTTATCCTAA AGCCAGCACG
GTCGAACGTT ACAGCAACGA GTCAGTTAAA ACGGTAATCA GTGTTGATTT AACAGAAAAT
GCTGGTTTAA ACACCTTCGT TAAAAATGGA GACCTCCTAA ACGTCAGATC AGCCTCAAGC
CGTATTGATA ATGCAATTAC TATCGCTGGT GCAGTCGTTC GCCCAGGTAA ATATCAGTGG
ACTAAAGGCT TAACGGTTTC TGATTTACTC CCTTCAATTT GGGGTGACCT TACTATCTCT
GCTGATTTAG ATTACGCGTT ACTTGTTCGT GAAATAAACC AACGTGGCGA TATTCAAGTT
GAGCGTATAG CGCTCGGACG AGCAATCGGT GAGCCCAAAT CACACTATAA TCCAAATCTA
AAGCCACGCG ATTCAATAAT TGTATTTGAC TATGCAGACC GCGAAGAACT ATTAAAGCCA
ATAATTAAAA AGCTTAGAGA ACAAAGCCGT TTTGGCGATG CAGCTAAGTT AGTTAACATC
AATGGTAACG TGCGTTTCCC TGGGCAATAC CCAATTACCA TCAATGCTGA TATTAAAGAG
TTACTGATCG CTGCGGGTGG TTTAGAGGAA GGGGCTTATA CCCTTGCGGC AGAATTAACA
CGTCAAAATA TTTCTGAGCA AAATGGAGTG TCTATTGAGC ATGTTCAGCT GAGTTTAGAT
CACGTAATGC AAAATGATCC AGCTGCAAAT ATCAAACTGC AGAGTCGCGA CAGTTTGACT
GTACGTACAC TACCTGATTG GCAGGAGAAT CGTTGGGTTA CGATTAAAGG GGAGGTTAAA
TTCCCCGGTA CTTATAGTAT CCAGCGTGGT GAAAGCTTAA AAGATGTCTT GGCGAGAGCA
GGTGGCTTAA CCACAGATGC TGCGCCACGA AGTGCGGTAT TTTTACGTAA GTCAGTAAAA
GATAAAGAGC AACTTGAGTT ATCAAAACTT GCTGATGAAT TACGTCGTGA AATTGCCGCT
AAAGCGTTGA CGAAAGATAC ACCAACCATT GGCTATAACG ATGCGCAGCT GATGCTAAAT
CAGCTTGAAA ATGTTAAAAC TGTCGGCCGA TTAGTTGTTG ATGTCAATGC CATTGAACTG
GGGATAGATA GTGCTAACCT TATGCTTGAA GGTGAGGATG CCCTGTACAT TCCTGCGACT
AATCAAACCG TGTCAGTCAT GGGTCAAGTG CAGCACCCAA GCACACATAG ATTTAAACAA
GGTTTAACAT TCGATCAATA TCTGGCTTTA TCCGGCGGAG CCCGTAAACG TGCCGATGAA
TCACGTTCAT ATGTTCTAAA AGCGGATGGT TCAGTTCAAA TTCCAGAATC ATCTTTCTGG
TTCAACGGTG GCAGTGCTAT GGAACCCGGT GATACCATAG TTGTGCCATT AGATACTGAA
TACAAAGATA ACCTAACGCT TTGGAGCCAA ATCACAGGCA TTATCTACAA CACCGCTGTT
GCAGTGTCCG TAATCTCAGG GCTTTAG
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| Protein sequence | MLRQVKKFII LGISAAILMG AQANAITPSP QMIEQFKALP KSEQERLARQ YGVDPSMITG
AGATATVVEN PTVVTPRAMK NDVVDQSESE ELNQATKSEA KVEAIEGKKE NQLKRFGYDL
FAGSPSTFAP VSDVPVPAEY MIGPGDSLNV QLFGKENNQY TLTVGRDGAI QFPNLGPISL
IGLSFAEVRE LLQQKISQSM IGIESNITMG ELRSIRIFVA GDAYQPGSYT VSSLSTITQA
LFVSGGVNQI GSLRDIQIKR AGKTVGRLDL YDLLLRGDAS GDIRLQSGDV VFIPSSGGSV
SVMGEVRRPA IYELKNNETM ADVIRMASGL NPGAYPKAST VERYSNESVK TVISVDLTEN
AGLNTFVKNG DLLNVRSASS RIDNAITIAG AVVRPGKYQW TKGLTVSDLL PSIWGDLTIS
ADLDYALLVR EINQRGDIQV ERIALGRAIG EPKSHYNPNL KPRDSIIVFD YADREELLKP
IIKKLREQSR FGDAAKLVNI NGNVRFPGQY PITINADIKE LLIAAGGLEE GAYTLAAELT
RQNISEQNGV SIEHVQLSLD HVMQNDPAAN IKLQSRDSLT VRTLPDWQEN RWVTIKGEVK
FPGTYSIQRG ESLKDVLARA GGLTTDAAPR SAVFLRKSVK DKEQLELSKL ADELRREIAA
KALTKDTPTI GYNDAQLMLN QLENVKTVGR LVVDVNAIEL GIDSANLMLE GEDALYIPAT
NQTVSVMGQV QHPSTHRFKQ GLTFDQYLAL SGGARKRADE SRSYVLKADG SVQIPESSFW
FNGGSAMEPG DTIVVPLDTE YKDNLTLWSQ ITGIIYNTAV AVSVISGL
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