Gene Shew185_2886 details

Gene Information

• Locus tag: Shew185_2886
• ID: 5369369
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 3464527
• End bp: 3464973
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640831130
• Product: lipoprotein
• Protein accession: YP_001367083
• Protein GI: 153001402
• COG category: [M] Cell wall/membrane/envelope biogenesis; [P] Inorganic ion transport and metabolism
• COG ID: [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAT CACTATGTTG CATCGCACTT CTGGCCTTAT TTACCACGGC TTGCTCTGAA 
GCCCCCAAAG AAGAAACCGC AGTCGATACA ACCCAAGTTC AAACAGACGC CGCTAAAACC 
GTCCCTGTTG GTGATACTAG CCAAAATTCA CTCGATTGGG CAGGCAGCTA TGAAGGCGTG 
TTGCCTTGCG CCAGTTGCGA AGGTATTCAA ACCCTGATCA CATTACAATC TGATAATAGC 
TTTGTTCAAG AAACGGTTTA TTTGGGCAAA GATGAGAAGA TTTTAAAACT GATGGGTAAA 
GCGGCGTGGG ATGAGAAAGG CCAAAAAATC ACCTTAGAAG ATGGCACACA ATATCTGGTC 
GGTGAAAATC AGCTGATCAT GTTAGATACT GAAGGCCAAA GAATTACTGG CGATCTAGCT 
GCTAATTATG TGTTGAAAAA GAAATAA 

 

Protein sequence

MNKSLCCIAL LALFTTACSE APKEETAVDT TQVQTDAAKT VPVGDTSQNS LDWAGSYEGV 
LPCASCEGIQ TLITLQSDNS FVQETVYLGK DEKILKLMGK AAWDEKGQKI TLEDGTQYLV 
GENQLIMLDT EGQRITGDLA ANYVLKKK