Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2836 |
Symbol | |
ID | 5370463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3402154 |
End bp | 3403020 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640831080 |
Product | acyl-CoA thioesterase II |
Protein accession | YP_001367033 |
Protein GI | 153001352 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.19028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGG TATTAGACGA TCTTTTATCA TTACTTTCCC TTGAGCAAAT TGAAATCGGC CTCTTTCGTG GTCAGAGCCA AGATCTGGGA TTTGGGCATG TGTTTGGTGG TCAAGTGATG GGGCAAGCGC TGAGCGCCGC TAAACAAACC GTCCCCGCTG AGCGTAAGGT CCACTCATTA CACTCCTACT TTTTACGTGC CGGTGACGAG AAGTTACCGA TTGTGTATGA AGTCGAAAAT ATGCGGGATG GCGGCAGTTT TAGTGCCCGC CGCGTGAGTG CAATCCAAAA AGGTCGACCG ATTTTCCACA TGACCTGTTC CTTCCAAGAA CCTGAAGAAG GATTTAGTCA TCAAGCGATG ATGCCGCAAG TACCAGGACC TGAAGGTTTA TTGAATCAGC AGGAATTAGC GCTGACGATG CGGGATAAAG TGCCGCCTAG CATACTCGAA AAGTTTATGG CCGATGCGCC CATTGAGATG CGACTGGTTA ATCCATTACA TCCCTTTGCG CCCAAAGAAA CCGAGCCGTA CCGTCATGTG TGGATGAGGG CCAATGGGCC CATGCCAAAT GACGCCCATA TTCATGAATA TTTACTCGCC TATGCCTCGG ACTTTAACTT TCTCGTGACA GCGGCTCAGC CCCACGGCGT GTCGTTTTTA AGTCCTGGAG TGCGCATGGC GACGATAGAT CATGCTATGT GGTTCCATCG CCCGATTAAT ATGGGAGAGT GGTTGCTTTA CAGTATTGAT AGCCCCAATG CCAGCGGTGG CAGAGGTTAC GTCAGAGGGC AGTTTTTTAA TCAACAAGGT GAATTAGTGG CTTCTTCTAC CCAAGAAGGC CTGATCCGCA TGGTAAAAGG ACGTTAA
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Protein sequence | MSQVLDDLLS LLSLEQIEIG LFRGQSQDLG FGHVFGGQVM GQALSAAKQT VPAERKVHSL HSYFLRAGDE KLPIVYEVEN MRDGGSFSAR RVSAIQKGRP IFHMTCSFQE PEEGFSHQAM MPQVPGPEGL LNQQELALTM RDKVPPSILE KFMADAPIEM RLVNPLHPFA PKETEPYRHV WMRANGPMPN DAHIHEYLLA YASDFNFLVT AAQPHGVSFL SPGVRMATID HAMWFHRPIN MGEWLLYSID SPNASGGRGY VRGQFFNQQG ELVASSTQEG LIRMVKGR
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