Gene Shew185_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2816 
Symbol 
ID5371686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3372553 
End bp3373449 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content47% 
IMG OID640831044 
Productputative CheW protein 
Protein accessionYP_001367013 
Protein GI153001332 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA AGGCAAGTCA GTCACAGGGA TTACTACTGT TTCGGTTATC ACAGACTCAA 
GTGTTTGCCT TAGGCACGTT GAAAGTGCGT GAGCTGGTGC CGTACACTCG TCTCAGTAAA
ATTCCTCAAT CTCATCCGAC GATTCTGGGG GCTTCAACTA TCCGTGGCCA TACGATTCCT
ATCATAGATA TGGCGGCGGC GATTGGTTAT CGGCCGATTG CCCCAGAAGA GCGTGAAAAG
TGCTACATCA TCATCACGGA TTGTCAGCGG ATGATCATTG GTTTCTTAGT GCGTGGTATC
GATAAGATTA TCGAATGCAA CTGGCGTGAT ATCGAAGCAC CTTCGTCTAG TTTGGGTAAA
AATGCCTATT TGACCGGCGT GACACGTTTC GAGGACCAAC TGGTACAGTT GCTCGACGTT
GAACTGTTAT TGTCGAAAAT CTTCCCCGAT AACCCAAAGG CAAATCGGGC TATTTTGACC
GACGTACAAC GTGAAAAACT CAAACCTATG AATATTCTTT TAGTGGATGA TTCTAAGGTG
GCACGTAAGC AGTTATCCGA CGCCCTTGAT ATGATTAACA TTCCTTATCG AGTCACGGCA
GACGGTAAAG AAGCGCTAGT GATGATGGAG CAAGCGGCAC TGGAACATCA CCCGATAGAT
ATTTTGGTGA GTGATATCGA GATGCCGGGA CTGGATGGTT ACGAACTGGC TTTTGAAGTG
CGTGATAATC CACTGACTGC CAAGGCCTAC ATTATTTTAC ACACGTCTTT ATCTAGCGAA
ATTAGCGTGA GTCAGGCCCA TCAAGTTGGG GCGAATGAAG CACTGACTAA GTTCGATGCC
CACGAGTTAA TCGACGCCAT GTTACGGGGC GCCGATCTCG CCTTAGACAA GCGCTAA
 
Protein sequence
MKSKASQSQG LLLFRLSQTQ VFALGTLKVR ELVPYTRLSK IPQSHPTILG ASTIRGHTIP 
IIDMAAAIGY RPIAPEEREK CYIIITDCQR MIIGFLVRGI DKIIECNWRD IEAPSSSLGK
NAYLTGVTRF EDQLVQLLDV ELLLSKIFPD NPKANRAILT DVQREKLKPM NILLVDDSKV
ARKQLSDALD MINIPYRVTA DGKEALVMME QAALEHHPID ILVSDIEMPG LDGYELAFEV
RDNPLTAKAY IILHTSLSSE ISVSQAHQVG ANEALTKFDA HELIDAMLRG ADLALDKR