Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2807 |
Symbol | tgt |
ID | 5372500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3363914 |
End bp | 3365038 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640831035 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_001367004 |
Protein GI | 153001323 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000311087 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTG AATTAGATAC TACCGACGGC CGTGCGCGCC GTGGTCGGTT GATTTTTGAC CGTGGCACAG TAGAAACCCC AGCATTTATG CCTGTGGGAA CCTACGGCAC AGTTAAAGGT ATGACGCCAG AAGAAGTGCG TGCTACAGGC GCAGACATTC TGCTCGGTAA TACTTTCCAT TTATGGTTGC GCCCAGGCGA AGAAATCATG CGTAAGCACG GTGACTTGCA TGATTTTATG AACTGGCAGC GTCCTATTTT AACTGACTCG GGTGGTTTCC AAGTATTCAG TCTTGGCGAT ATCCGTAAGA TCACCGAAGA AGGTGTGCAT TTCCGTTCGC CAATCAATGG CGAGAAAATC TTCTTAGATC CTGAAAAATC AATGCAAATT CAAGATGCAT TGGGCAGTGA TGTAGTGATG ATTTTTGACG AATGTACGCC ATATCCCGCA ACCGAAGACG AAGCGCGTAA GTCAATGCAG ATGTCTCTGC GCTGGGCGAG ACGTTCACGT GATGAATTTG ACCGTTTAGA GAACCCTAAC TCTCTGTTCG GTATTATTCA GGGCGGTGTG TATGAAGATT TACGCGACGA AAGCTTAAAA GGCTTAGTCG ATATTGGTTT CGACGGTTAT GCCGTCGGTG GTTTGGCCGT AGGAGAGCCT AAAGCGGATA TGCATCGCAT TCTTGAGCAT ATTTGCCCGC AAATTCCTGC AGACAAACCT CGCTATCTGA TGGGGGTCGG TAAACCAGAA GATTTAGTTG AAGGTGTACG TCGTGGTGTT GACATGTTTG ACTGTGTGAT GCCAACCCGT AATGCCCGCA ACGGTCATCT GTTTACGAGT GAAGGTGTGA TCAAAATACG CAATGCGCGT CATAGAGATG ACACGTCACC ACTTGATACT AAGTGTGATT GTTATACCTG TAAAAATTAT TCACGGGCGT ACCTTTACCA CTTAGATCGT TGTAATGAGA TTCTGGGTGC GCGTTTAAAC ACCATTCACA ACTTGAGATA CTATCAAATG TTAATGGAAG GTTTGCGCGG TGCGATTGAG ACGGGTACAT TAGACGCCTT TGTGGCGGAC TTCTATACCA GTCAAGGTCG CGAAGTACCA GAGTTAGTCA ATTGA
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Protein sequence | MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI FLDPEKSMQI QDALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWARRSR DEFDRLENPN SLFGIIQGGV YEDLRDESLK GLVDIGFDGY AVGGLAVGEP KADMHRILEH ICPQIPADKP RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDT KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVAD FYTSQGREVP ELVN
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