Gene Shew185_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2760 
Symbol 
ID5371740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3304849 
End bp3308280 
Gene Length3432 bp 
Protein Length1143 aa 
Translation table11 
GC content49% 
IMG OID640830988 
Producthypothetical protein 
Protein accessionYP_001366957 
Protein GI153001276 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG3170] Tfp pilus assembly protein FimV 
TIGRFAM ID[TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.20005e-05 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTC GCACTTCGTA TCTTGTGGGT CTAATGGCCA CTGTTTTAGC TGTTTCTTCT 
ACCGCTTATT TTATTGATCC CGCCGTTGCA GCAGATACGC CAAGATTAAA ACCCTTAAAA
ATCATGGGGC CAGACGGACA GATCCGTCAA GTTAATCATC AATATGGCCC AACGACATCC
AGAGACACTT TTTGGAGCAT AGCGCAAAAA GTCCGTCCCG ATGCCAGTGT CAGCGTCTAT
CAAGTGATGG CCGCGCTATA TGATGCTAAC CCCCATGCGT TTAACTCTGC CAGCTACAAC
AGTTTAGAAC GTGGCATGAT CCTGCTGATC CCGTCTAAAG AAGTCATGCT GTCGATTCCC
AATAGTATGG CGATAGCAAG AGCAGAGCAA AGCGACAGAC AATCCCGTGC GCCAGCGAAA
GCGGTGCAGA AACCTGCTGC GAAAGTCACT ACGCAAGCGC CTGTTACTGC TCCTGTTGTG
ATTGCTGAAA CCAAAGTGAT CACTGAAACC AAAGTGACGC CGCCCAAAGT GCCAGTGGTA
GAAACGCCGG CGCCAGACAA GCCTAAGATG CTGAGCTCTG ATGTAACGTC GCGCTTAGAA
GCGGCTGAAA GTAAAAATCT GTCATTAACC GATGAATTAG CTCGCACCCA AGATCAACTC
ACTGTCCGCA CTTCAGATGT TGAAGCGCTA AAAGTGAAAG TTGAAGAATT GAATCAACGC
ATTGCCGTGC TAGAAGAAAC CCTGCAAGCC AGCAAACTGC AAAATCAAGC TTTGAAAGCC
GAAGTTGAAG CCGCCCAAAC GCCAGAGATG GCAACGGGAA CGGCTGAAGC TGAGACTCAG
GCGCCTGCTG AGCCCGATGA TTTATGGCGT AATATCCTCA ACAGTCCAGT GTTAATGATT
GCTGCTGCTG TGATCCCTGC CTTGTTCTTG TTACTGGCGG TGTTCTGGTT GCTGCGCCGT
AAGCGTAATA AAGAACGTCG TGAAATGCAG GCGCAAGAAG CGGTGATGGC CGCGGGTGCT
GCTGGCGTTG CAGGTACTGC CATCATGGAC ATGGATGATG ACGACTTAGA TGATATGGCG
GTGCATTTAG ATACCGACCA TGCCGACTCT ATCGATAGCT TGCTTGATAT GGGCAGCGTC
GATTTACAAC CTGAGCAAGA TTTGACTGAC TCAAACGATC AGATGGATAT GGCGTCTGAA
ATGTTTGTCG ATCCGGGTCT CTCTGCTGAA CCTGAGGTTG AAGACGAAGG TCAGTCTCTT
GATGACCTGT GGGCCGAAGC CATGGGCGAT CAGGAAGAGG ATATTGTTGA GGAGAAACCT
AAATCTGACA ATATTCTTGA GGAAGCCGAT CTCGATGCGC TATTAGCGGG CCTAGGTTCA
GAAGACAACA CTGACGCTGA AGACGATTTA AGTGAATTAG AGCGAAACTT TGCTAGCGAT
TTAGCTGAAG AAGACGTTGA AGTAGAAGAT ACTCAAGCTG CCAATGAAGC CGTCGCCGAT
GACGATGATC TCGATGCCTT ACTTGCCGAG TTTAGTGTTC CTGCTGAAGC TCCAGAAACG
GCAAAAGAAC CTGCAACAGC ATCTATTGAG TCTAACGATG AAGATCTCAG TGCCGCCATC
GCCGCAGAAC TCGATGATGA GCTAGATGAT GAACTGGGCG GAGAAGAGGT TGATGATATC
GATGCCCTAT TGGCCGATTT CGATAAACCA ACGCCAACCG CAGAACCTGA AGTCGAATCT
GATCTTGGCG CTGAAATTGC CGCCGAGTTA GATGCCGAAC TTGATGAGCT GGGCGTAGAA
GATACCGATG ACATCGATGC CTTGTTAGCA GATTTTGATA AACCAGCAGA ACCTGAAGTC
GAGCCTGATC TTGGCGCTGA AATTGCCGCC GAGTTAGACG CAGAGCTGGA TGAACTGGGC
GTAGAAGACA CTGACGATAT CGATGCGCTG TTAGCAGACT TTGATAAACC AGTAGAACCC
GAAGCAGAGC CTGATCTTGG CGCTGAAATT GCCGCCGAGT TAGATGCAGA GCTTGATGAG
CTTGGCGTCG AAGACACTGA CGATATCGAT GCGCTGTTAG CTGATTTCGA TAAACCAGCA
GAACCCGAAG TTGAACCCGA TCTTGGCGCT GAAATCGCCG CCGAGTTAGA CGATGAACTG
GATGAATTAG GCGTAGATGA ATCCGATGAT ATCGATTCGT TGTTGGCGAG TTTTGATGCT
GAGCCTGAAA TCAAAGTTGA TGCTGAAGAC AATGCCGAAA ACGATACCGC AGATGATGCG
ATCAGTGCAG AAATTGCCGC AGAGCTAGAA GCTTCGTTAC CGGAAGATAT CAAGGGCGAA
GCGTCAGGCG ATGAAGATTT AGATGCGCTG TTAGCTGAAT TTGATGTGCC AGAGCAACTC
GATGCCGATG AAGATGAATT CGACTTCGAT ATGGAAACGG CGCAGCTTGA TGCGGACGAT
AACGCCACAG ATGAAGACAA TTTACTCAAA GGTATTGGTG CGTCTCACTC GATTGATGGC
ACTGATGATA CTTTCTCGTT AGTTGAAGAG TTGGGTGAAG ATGATGATTC TGACGCCCTG
ACTACGGCTG CAGCCACTTT GGCAGCCGCT ACCGCGGCAG CGAGTGTTAA GGAAAAAGAG
TCTTCTTTCT TTAATGATTT AAAAGCCAAT AAGAGCAAAG ATCCCCACGT GCTTGATTGG
GACTCAGAGC TTGATTTTGC GCCTAAGGCC AAACCTGCTG CGACGCCAGC CGATGCCGCC
GCTGAAACGG ATGTCGAGCC TAATGCCGAT GCTTCGCTAG CTGATACGCC TACTCCGGAT
GATGCGACTC AAGAGAAGCC GATTAAGGCG ACGCGTAACG ATGTTGATTT TAGTGAAGAT
TTTAAACTCG ATACCCAAGA GGATGCTGAC GATTCTGAGC AAGGCCTCGA TTTAAGCGAC
GACAATGTAC TTGCTGCTTT CACGGCCAAT ACCGATTTTG ATGACGATGA AGATGTACTG
ACGTCGGAAG ACAGTTTCTC ACTCGTCGAT GATCTCACAG TCGATGAAGC GTTAGCTGCA
CTCGATGCTC AAGAGTCGCG TAAAGCGCAG AAGAAGTTTG TTCCTGAGCA TGATTTAACG
AATTTCCAAA ATGAAAACGG CTTTATCGAC ATCGACAAGT TGTTGAATGA TGCCGATGAA
GACGGCACTG ATACCGATTT GTATTCGGAA GTCGACGTGG AAATGAGTGA TGTCGGAGCC
TTAATTGGCG ATGCCGCTAT GATTGATGTC GATGATGAAG AAAACTCAGT CAACGCTAAG
CTGGATTTAG CCCGCGCTTA TATCGAAATT GACGACAGCG ACAGCGCCAA AGCCCTGCTC
AAAGAAGTGC AAATTGACGG TAATGAGCGC CAGCAAGATG AAGCCGGACG TTTACTCAAA
GAGATGAGTT AA
 
Protein sequence
MKFRTSYLVG LMATVLAVSS TAYFIDPAVA ADTPRLKPLK IMGPDGQIRQ VNHQYGPTTS 
RDTFWSIAQK VRPDASVSVY QVMAALYDAN PHAFNSASYN SLERGMILLI PSKEVMLSIP
NSMAIARAEQ SDRQSRAPAK AVQKPAAKVT TQAPVTAPVV IAETKVITET KVTPPKVPVV
ETPAPDKPKM LSSDVTSRLE AAESKNLSLT DELARTQDQL TVRTSDVEAL KVKVEELNQR
IAVLEETLQA SKLQNQALKA EVEAAQTPEM ATGTAEAETQ APAEPDDLWR NILNSPVLMI
AAAVIPALFL LLAVFWLLRR KRNKERREMQ AQEAVMAAGA AGVAGTAIMD MDDDDLDDMA
VHLDTDHADS IDSLLDMGSV DLQPEQDLTD SNDQMDMASE MFVDPGLSAE PEVEDEGQSL
DDLWAEAMGD QEEDIVEEKP KSDNILEEAD LDALLAGLGS EDNTDAEDDL SELERNFASD
LAEEDVEVED TQAANEAVAD DDDLDALLAE FSVPAEAPET AKEPATASIE SNDEDLSAAI
AAELDDELDD ELGGEEVDDI DALLADFDKP TPTAEPEVES DLGAEIAAEL DAELDELGVE
DTDDIDALLA DFDKPAEPEV EPDLGAEIAA ELDAELDELG VEDTDDIDAL LADFDKPVEP
EAEPDLGAEI AAELDAELDE LGVEDTDDID ALLADFDKPA EPEVEPDLGA EIAAELDDEL
DELGVDESDD IDSLLASFDA EPEIKVDAED NAENDTADDA ISAEIAAELE ASLPEDIKGE
ASGDEDLDAL LAEFDVPEQL DADEDEFDFD METAQLDADD NATDEDNLLK GIGASHSIDG
TDDTFSLVEE LGEDDDSDAL TTAAATLAAA TAAASVKEKE SSFFNDLKAN KSKDPHVLDW
DSELDFAPKA KPAATPADAA AETDVEPNAD ASLADTPTPD DATQEKPIKA TRNDVDFSED
FKLDTQEDAD DSEQGLDLSD DNVLAAFTAN TDFDDDEDVL TSEDSFSLVD DLTVDEALAA
LDAQESRKAQ KKFVPEHDLT NFQNENGFID IDKLLNDADE DGTDTDLYSE VDVEMSDVGA
LIGDAAMIDV DDEENSVNAK LDLARAYIEI DDSDSAKALL KEVQIDGNER QQDEAGRLLK
EMS