Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2753 |
Symbol | |
ID | 5369479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3296753 |
End bp | 3298870 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830981 |
Product | DNA topoisomerase III |
Protein accession | YP_001366950 |
Protein GI | 153001269 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCTCT ATATCGCAGA AAAACCTAGC CTAGGGCGGG CCATTGCCGA TGTATTGCCT AAACCCCATA AAAAAGGCGA TGGATTTATC GAAGCCGCCA ATGGCGATTG CGTGTCTTGG TGTGTCGGTC ACTTGCTCGA ACAAGCAGAA CCTGATGCCT ATAATCCCGA ATTTAAGTCG TGGAAATTCG AGCACTTGCC AATAGTTCCA GACAAGTGGC AACTAAAACC TAAGGCCGCA ACTCGCAGTC AACTCACAGT GCTAAAACGA TTAGTCAAAC AAGCCAACAT GCTGGTCAAT GCGGGCGATC CCGACCGTGA AGGGCAGTTA CTCGTGGATG AAGTGATTGC CTATCTTGGC GTGAGGGGTG ACAAGTTACA TCAAACTCAG CGTTTACTGA TCAGCGACTT AAACCCACAA GCCGTAAAAC GGGCGCTAAC GCAGCTGCGC AGTAATCGCG AATTTATTCC TTTGTCCACA TCGGCCTTAG CCCGTAGTCG TGCCGATTGG CTCTACGGCA TGAATATGAC GCGCGCTTAT ACCATCCAAG GTAAAAAGGT TGGTTATCAA GGCGTATTGT CCGTCGGGCG AGTGCAAACG CCTTTACTCG GGCTAGTGGT GCGCCGTGAT GAAGAGATTG CCAATTTTCA ATCTAAACCT TTCTATGAAG TGCTAGCGCA TTTGGCGACT GAAAAGCAGG AAACCTTCAG CGCTAAGTGG CAACCCAGCG AAGCTTGTCA GCCGTACATG GACGAAGAAG GGCGAGTACT AGCCAGAGGG TTAGCGCAAA ATGTGGTGAG TCGCATCAGT GATAAACCTG CCTTAGTGAC TCAATTAGTG GCTAAGGACA AGAAACAGAA TCCGCCATTG CCCTACAGCT TATCCGCGTT GCAGATTGAT GCGGCAAAAC GGTTTGGCAT GAGTGCTAAG GATGTGCTTG ATACCTGCCA GAGTTTGTAT GAACGCCATA AACTCATTAC CTATCCCCGT TCCGACAGCC GTTATTTGCC CGTCGAGCAA CATAGCCTAG CGCCGTCGGT TCTTAAGGCG ATTAGCAGCG GTGCCGCTGA GTTACTGCAA GGCGCCGATG CCCCCGATCC ACGGCTTAAA TCCAAGGCAT GGGATGATAA AAAAGTGGAT GCCCACCACG CCATTGTTCC AACCGAGAAG ACGGCTAACT TATCCAGTTT GAGTCAGCGT GAGAGGCAGT TATATCTTCA TGTGGCCCGC CAGTACTTAG CCCAGTTTTA TCCGGCCTAT TGTTACAGTG AAACCACGGT ACAAGTGACA ATTGAGGGCG GCTTATTTAA TACCAAGGCG CGTCAGGATA AATCTCTTGG CTGGAAGCAG CTCTTTGCCC GCCAAGAGCC AAATGGTAGT AAGGCGAGTG GTAACAAGTC GACGGAAGAA AGCGCGGGTA AGGATGATGA GGAGAATGAC GAGTTTATCG GCCAATTACC GCCTCTGAAA CTAGGGCAGG CTTTGCATTG TACTCGAGGC GAGTTGCTGG AGAAAAATAC TCAGCCTCCA AAAGCCTTTA CCGATGCCAC TTTACTTGGT GCTATGACGG GTATTAGCCG TTATGTGACC GACCCTGAGA TCCGTAAAAT TCTTAAAGAA ACTGATGGAT TAGGTACTGA GGCCACCCGT GCTGGTATTA TCGAATTGCT GTTCAAACGC GGTTTTTTAC AACGCTTAGG TAAATCTATC GTTTCGACGG ATGTGGGTAA GGGATTAATT AACAGCTTAC CCGCGAGTGC AACAACGCCT GACATGACCG CCCTGTGGGA AGCCAGCTTG AACGGTATTT GTCATAAAGA AACCTCCTAT CAAGCCTTTA TGCAACCGCT GCTCGGCACT TTATCCACGC TTATTCAAAA CGCAGGAGCA CAACTGCCTA CCGCGCTTAA TGGCTTAAAA GGCCAAGGTT ATCGCAAAAC GGCTGGGAAT AAATCCGGTT ATCGCAAGTC GCCTTACCGC AAAGCCTCTA GCTCGACAAA ACGCACTGGC ACGGCAAGTA CCGCTAAAAC AAGTACAACG ACAAGTAGCA GTGCGAAAAA GTCGAGTGCG AGTTCAGGGA CTCGGAGTCG CACACGCAAA GTGGCTGCTG AGGTTTGA
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Protein sequence | MILYIAEKPS LGRAIADVLP KPHKKGDGFI EAANGDCVSW CVGHLLEQAE PDAYNPEFKS WKFEHLPIVP DKWQLKPKAA TRSQLTVLKR LVKQANMLVN AGDPDREGQL LVDEVIAYLG VRGDKLHQTQ RLLISDLNPQ AVKRALTQLR SNREFIPLST SALARSRADW LYGMNMTRAY TIQGKKVGYQ GVLSVGRVQT PLLGLVVRRD EEIANFQSKP FYEVLAHLAT EKQETFSAKW QPSEACQPYM DEEGRVLARG LAQNVVSRIS DKPALVTQLV AKDKKQNPPL PYSLSALQID AAKRFGMSAK DVLDTCQSLY ERHKLITYPR SDSRYLPVEQ HSLAPSVLKA ISSGAAELLQ GADAPDPRLK SKAWDDKKVD AHHAIVPTEK TANLSSLSQR ERQLYLHVAR QYLAQFYPAY CYSETTVQVT IEGGLFNTKA RQDKSLGWKQ LFARQEPNGS KASGNKSTEE SAGKDDEEND EFIGQLPPLK LGQALHCTRG ELLEKNTQPP KAFTDATLLG AMTGISRYVT DPEIRKILKE TDGLGTEATR AGIIELLFKR GFLQRLGKSI VSTDVGKGLI NSLPASATTP DMTALWEASL NGICHKETSY QAFMQPLLGT LSTLIQNAGA QLPTALNGLK GQGYRKTAGN KSGYRKSPYR KASSSTKRTG TASTAKTSTT TSSSAKKSSA SSGTRSRTRK VAAEV
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