Gene Shew185_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2713 
Symbol 
ID5372822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3250091 
End bp3251107 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content45% 
IMG OID640830941 
Productputative periplasmic protease 
Protein accessionYP_001366910 
Protein GI153001229 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.22492e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAATTTT TATACGAGTA TGGAATGTTT TTGGCGAAAG CCGTCACGAT AGTGGTCGCA 
ATCGTTGCGG TTATTATTGT GGTGTTGGCT TCCACTGTTA AACATAAGTC AGATAAGGGC
GAGCTGAGGA TCACTAACCT GTCTGAAGAG TTAGAAGAAC GGAAGCATGG CTTAAAAGAA
GAACTCCTTT CAAAGAAGCA ATTCAAAGCC TATGAGAAGC AATTAAAGGC CGAAGAAAAG
GCGAAAGACA AAGCTGCTGA TGATGCCAGC ACGGGCAAAG TGTTCGTGAT CGATTTCAAG
GGCAGTATCG ATGCCGCTGA GGTTGCGTCA CTGCGCGAAG AAATCAGTGC CATTTTAGCT
ATCGCGGAAA AAGGCGATGA AGTGGTTGTT AATGTCGAGA GTGGTGGTGG TATGGTGCAT
GGCTATGGTT TAGCCTCCAG CCAGCTTGAC CGTTTACGCC AAGCCGATAT TCCGCTAACA
GTCTGCGTTG ATAAAGTGGC TGCCAGTGGC GGTTATATGA TGGCCTGTGT TGCGAATAAA
ATTTATGCGG CGCCTTTTGC AATTGTTGGT TCAATTGGTG TTGTTGCTCA ACTGCCGAAC
TTTAATCGTT TGCTGAAAAA GCATGAAATC GATTATGAGC AACATACGGC CGGTAATTTT
AAACGTACCT TGACAGTGTT TGGTGAAAAC TCCGATGAGG GAAGACAGAA GTTTCAAGAA
GAACTCGAAG AAACCCACGT CTTATTCAAA GCGTTTGTCG GTAAATATCG CCCTGAGTTG
GATTTAGTGA AAGTAGCCAC GGGCGAGCAT TGGTATGGCC AGCAAGCCAT TGAATTAGGG
TTAGTCGATG CGATTTCGAC CAGTGATGAT GTGATTATGT CACTTGCCGC AGAGCGCACT
GTGTATAAGA TGCGTTATCA GGTGAGAAAG AAACTTGCCG ATAAAATTGC CCATGGCGCA
TCTTTATCTG TGAATGCTAT TTTTAATCGT CTTATCGAGA AAAACCGTCC AATGTAA
 
Protein sequence
MEFLYEYGMF LAKAVTIVVA IVAVIIVVLA STVKHKSDKG ELRITNLSEE LEERKHGLKE 
ELLSKKQFKA YEKQLKAEEK AKDKAADDAS TGKVFVIDFK GSIDAAEVAS LREEISAILA
IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQADIPLT VCVDKVAASG GYMMACVANK
IYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGNF KRTLTVFGEN SDEGRQKFQE
ELEETHVLFK AFVGKYRPEL DLVKVATGEH WYGQQAIELG LVDAISTSDD VIMSLAAERT
VYKMRYQVRK KLADKIAHGA SLSVNAIFNR LIEKNRPM