| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2713 |
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| Symbol | |
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| ID | 5372822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3250091 |
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| End bp | 3251107 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640830941 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001366910 |
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| Protein GI | 153001229 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000822492 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAATTTT TATACGAGTA TGGAATGTTT TTGGCGAAAG CCGTCACGAT AGTGGTCGCA
ATCGTTGCGG TTATTATTGT GGTGTTGGCT TCCACTGTTA AACATAAGTC AGATAAGGGC
GAGCTGAGGA TCACTAACCT GTCTGAAGAG TTAGAAGAAC GGAAGCATGG CTTAAAAGAA
GAACTCCTTT CAAAGAAGCA ATTCAAAGCC TATGAGAAGC AATTAAAGGC CGAAGAAAAG
GCGAAAGACA AAGCTGCTGA TGATGCCAGC ACGGGCAAAG TGTTCGTGAT CGATTTCAAG
GGCAGTATCG ATGCCGCTGA GGTTGCGTCA CTGCGCGAAG AAATCAGTGC CATTTTAGCT
ATCGCGGAAA AAGGCGATGA AGTGGTTGTT AATGTCGAGA GTGGTGGTGG TATGGTGCAT
GGCTATGGTT TAGCCTCCAG CCAGCTTGAC CGTTTACGCC AAGCCGATAT TCCGCTAACA
GTCTGCGTTG ATAAAGTGGC TGCCAGTGGC GGTTATATGA TGGCCTGTGT TGCGAATAAA
ATTTATGCGG CGCCTTTTGC AATTGTTGGT TCAATTGGTG TTGTTGCTCA ACTGCCGAAC
TTTAATCGTT TGCTGAAAAA GCATGAAATC GATTATGAGC AACATACGGC CGGTAATTTT
AAACGTACCT TGACAGTGTT TGGTGAAAAC TCCGATGAGG GAAGACAGAA GTTTCAAGAA
GAACTCGAAG AAACCCACGT CTTATTCAAA GCGTTTGTCG GTAAATATCG CCCTGAGTTG
GATTTAGTGA AAGTAGCCAC GGGCGAGCAT TGGTATGGCC AGCAAGCCAT TGAATTAGGG
TTAGTCGATG CGATTTCGAC CAGTGATGAT GTGATTATGT CACTTGCCGC AGAGCGCACT
GTGTATAAGA TGCGTTATCA GGTGAGAAAG AAACTTGCCG ATAAAATTGC CCATGGCGCA
TCTTTATCTG TGAATGCTAT TTTTAATCGT CTTATCGAGA AAAACCGTCC AATGTAA
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| Protein sequence | MEFLYEYGMF LAKAVTIVVA IVAVIIVVLA STVKHKSDKG ELRITNLSEE LEERKHGLKE
ELLSKKQFKA YEKQLKAEEK AKDKAADDAS TGKVFVIDFK GSIDAAEVAS LREEISAILA
IAEKGDEVVV NVESGGGMVH GYGLASSQLD RLRQADIPLT VCVDKVAASG GYMMACVANK
IYAAPFAIVG SIGVVAQLPN FNRLLKKHEI DYEQHTAGNF KRTLTVFGEN SDEGRQKFQE
ELEETHVLFK AFVGKYRPEL DLVKVATGEH WYGQQAIELG LVDAISTSDD VIMSLAAERT
VYKMRYQVRK KLADKIAHGA SLSVNAIFNR LIEKNRPM
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