Gene Shew185_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2668 
Symbol 
ID5371800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp3190550 
End bp3191221 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID640830897 
ProductGntR family transcriptional regulator 
Protein accessionYP_001366866 
Protein GI153001185 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.000195924 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGAA CTACGCCTAT AGTCCACAAA ACCCGCACCC AGTTAGTTGT TGAAGTGCTC 
AGAGAGAGAA TTCTTTCAGG TGACATAGCC GCAGGAGAAC CACTCAGACA AAGTGCGTTG 
GCTGAAGCGT TAAATGTCAG CCGCATTCCG GTGAGAGAAG CCTTATTGCA ACTCGAAGCC 
GAAGGACTCG TTAAGTTTGA GCCCCATAAA GGTGCAACGG CGACCGTGTT ATCCGTCGAG 
CAAGTCACCG AACTTTTTGA ATTACGTGCC ATGATCGAAA CCGATCTGCT CGCTAAGGCG 
ATCCCACTGC TTCAAGAAGC TGATTTAGAA AAAGCAGAAC GTGTACTCGA ACAATTGGAA 
TCGGCCTTCA AACATGAAGA TGCCGTTGCC AGTTGGAGCG AGTTGAATAC GCAATTTCAC 
ACTTGCTTAT ATCAGGCGGC TAATCGCCCA CACACCCTTG AGGTTGTTCA CGGCCTCAAT 
ACTAATTGTG ATAGATACAT TCGTTTGCAG TTATTGCTCG CGGGGGGGAT TCCTGCTGCA 
GAGCATGAGC ACAGAGCTTT ACTCAACCAC TGCAAACTGA GAGAAACAGA AAAAGCGACG 
GCGCTACTGC GTCATCATAT TCTGCATGCC GCAATGACAA TTCGAGATCT CGTCGCCAAA 
CAGGTGGTCT AG
 
Protein sequence
MSRTTPIVHK TRTQLVVEVL RERILSGDIA AGEPLRQSAL AEALNVSRIP VREALLQLEA 
EGLVKFEPHK GATATVLSVE QVTELFELRA MIETDLLAKA IPLLQEADLE KAERVLEQLE 
SAFKHEDAVA SWSELNTQFH TCLYQAANRP HTLEVVHGLN TNCDRYIRLQ LLLAGGIPAA 
EHEHRALLNH CKLRETEKAT ALLRHHILHA AMTIRDLVAK QVV