| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2658 |
|---|
| Symbol | |
|---|
| ID | 5370202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 3166013 |
|---|
| End bp | 3167752 |
|---|
| Gene Length | 1740 bp |
|---|
| Protein Length | 579 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640830882 |
|---|
| Product | gamma-glutamyltransferase |
|---|
| Protein accession | YP_001366856 |
|---|
| Protein GI | 153001175 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0405] Gamma-glutamyltransferase |
|---|
| TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0212012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCAA CAAGACCTTT TAGACCTCTT ATTCTCGCCA TTGCCATGGC GCTTCCCCTA
CTATCATCAC CCAGTCTGCT TGCCGAAGAA TCGTCAATTT TCAGCCAGAT GGCCACAGCA
CAACCTGTGT GGGCCAAGCA TGGCATGGTT GCCAGCCAAG AGACACTCGC CAGTCGCACC
GGCGTAGAGA TCCTAAAACA AGGCGGCAAT GCCGTTGATG CGGCCGTGGC CGTGGCCTTC
AGTTTGGCAG TCACTTTACC ACGTGCTGGT AATATCGGTG GCGGCGGTTT TATGCTGGTG
CATATTGCTA AAGAAAACAA AACCATCGCT ATCGATTACC GTGAAATGGC GCCATCTAAA
GCCAAAAAAG ATATTTTCCT CGATGAGAAT GGCGACGCAG TGGAAAAGCT GAGCCGCGAA
CACGGCCTTG CTGTGGGTGT CCCAGGTACC GTGATGGGCA TGAGCTTAGC CCTTGAAAAA
TATGGCACTA TGACACTCGC ACAAGTCGCC GCGCCCGCAA TTAAAATGGC GCAGGAAGGC
ATTAGCGTGA CGCCAGATCT TGCCGAATCC CTTGCAGGTC TAAAACGCCG CATGACCCAA
TGGCCAACCA CGGCTGCTAT CTTCTACAAA GCCGACGGCA GTGACTATCA AGTTGATGAT
ATTCTTAAAC AACCTGAGCT TGCCCATTCA TTAAGTCTGA TCGCTGAAAA AGGCACCAAA
GGATTCTACG AAGGTGAAAC CGCCACTAAG CTTATCAATG CGGTGAAAGA CGCTGGCGGC
ATTATGACTT TAGACGACCT TAAAAATTAT AAGGTTGTAG AACGCGAACC CGTGCGAGGC
GAATACCGTG GCTACGAGGT TGTGTCTATG CCACCGCCAT CATCTGGCGG CGTGCACATC
ATAGAAATGC TTAATGTGTT GCAACAATTC CCGATTGATA AACTCGGCCA CAATACGGCG
CAGACGATTC ATCTTATGGC AGAAACCATG AAGCACGCCT ATGCCGATCG CAGCGAATAC
TTAGGCGATC CCGACTTTTA TAAGGTGCCC GTCAAAGCCT TAACCAGTAA GGACTACGCC
CAAAAAATCG CCAGCCAAAT CGCGATGAAT AAGACAACGC CAAGCGCCGA AATCAAGCCA
GGTAAACTCG CGCCCTATGA GAGCGACCAA ACCACTCACT TCTCGGTAGT GGATAAATGG
GGCAATGCAG TTTCAAACAC TTACACCTTA AACTTCAGCT ACGGCTCAGG TTTAGTGGCC
AAAGGAACTG GCATTTTGCT CAATAACGAG ATGGATGACT TTTCAGCTAA ACCCGGCGTG
CCAAACGGCT ACGGTTTAGT TGGCGGTGAT GCCAATGCGG TCGAAGGCAA TAAGCGCCCA
TTGAGCTCCA TGAGCCCAAC AATAGTGATG AAGGATGGCA AACCCTTCCT CGTCACTGGC
AGCCCAGGCG GCTCACGCAT TATCACCACC ACACTGCAGA TCATCATGAA TGTGATCGAC
CATGGATTAA ACATCGCCGA AGCCAGTAAT GCAGCGCGGG TACACCATCA ATGGCTGCCC
GATGAACTGC GAGTCGAATC CAGCTTAAAC CGCGATACCA TTTCCTTGCT CGAAGCCAAA
GGCCACAAAG TGAAAGTACA GTCCGCTATG GGCAGCACGC AATCAATCAT GGTGACCGAA
CAAGGGATTT TTGGCGCGTC TGACCCTCGT CATTCAGGTA GCGAAGCCAT CGGCTACTAG
|
|---|
| Protein sequence | MRPTRPFRPL ILAIAMALPL LSSPSLLAEE SSIFSQMATA QPVWAKHGMV ASQETLASRT
GVEILKQGGN AVDAAVAVAF SLAVTLPRAG NIGGGGFMLV HIAKENKTIA IDYREMAPSK
AKKDIFLDEN GDAVEKLSRE HGLAVGVPGT VMGMSLALEK YGTMTLAQVA APAIKMAQEG
ISVTPDLAES LAGLKRRMTQ WPTTAAIFYK ADGSDYQVDD ILKQPELAHS LSLIAEKGTK
GFYEGETATK LINAVKDAGG IMTLDDLKNY KVVEREPVRG EYRGYEVVSM PPPSSGGVHI
IEMLNVLQQF PIDKLGHNTA QTIHLMAETM KHAYADRSEY LGDPDFYKVP VKALTSKDYA
QKIASQIAMN KTTPSAEIKP GKLAPYESDQ TTHFSVVDKW GNAVSNTYTL NFSYGSGLVA
KGTGILLNNE MDDFSAKPGV PNGYGLVGGD ANAVEGNKRP LSSMSPTIVM KDGKPFLVTG
SPGGSRIITT TLQIIMNVID HGLNIAEASN AARVHHQWLP DELRVESSLN RDTISLLEAK
GHKVKVQSAM GSTQSIMVTE QGIFGASDPR HSGSEAIGY
|
|---|
| |