Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2630 |
Symbol | |
ID | 5369461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3139032 |
End bp | 3140348 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640830854 |
Product | lytic murein transglycosylase |
Protein accession | YP_001366828 |
Protein GI | 153001147 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000526618 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTAAAA TTAAAGGGTT AACTTATCTG TTTGCGAGTA TTGCCGCCTG TGTCAGTCTG AGTGCCTGTT CTAGCGTGCC AGCGGCGAGT GCCAGTACTA AGGCAAGCAC TAACGCGAGC AGTAGCAACG CAAGTGGCAT AGCCGCAGAA GCCAACCCAA TGCCTGATAT CAGTGCTAGC GTACAAGAAA ATGCCGAGGC ATTTCCGAGT TGTGTGACTG GGCTACAAGC GCGGGCGCGC ACCGAAGGGC TGTCAGAGGC GACGATTAAC TCGACCATTG CAAATTTGAA ATTTGTGCCT CGGGTGATTG AGCTCGATCA GCAACAACCT GAATTCAGCC AGACATTCGA TAATTATTTC AGTAAGCGCG CCACCGAATG GCGCGTCAAT GAAGGCCGTC GTTTACTGCA AAAGCACAGC GTATTACTCA ATCAATTAGC CAAAGAATAT GGCGTGCCAC CGCAATATAT CTTGTCTTTT TGGGGGCTTG AAACTAACTA CGGTTCCTAT AAAGGCAAGA TGTCGGTATT GAATTCGCTT GCGACTTTGG CCTGTGAGCC ACGCCGTAGC AATTATTTCA CCATAGAATT GATGCAAGCC TTAAAGCTGA AAGAAAAGTA TCAGTTTGAT GATGACACTA TGGTGGGATC ATGGGCTGGT GCTATGGGAC ACACGCAATT TATGCCGTCG GCCTATGCCA AATATGCCGT CGACGGTGAC GGCGATGGTA AAGCCGATTT ATGGAATAGC ACCACTGATG CGCTGACTTC CGCCGCGAAC TTTTTACAGC ACTTAGGCTG GCAGCGAAAT GAACGCTGGG GCCGTGAAGT CTTATTGCCA AAGGATTTTA GTTACAGCCA TTTAGGTGCA AAGCAGCCCT TGGCGTTATC GGAATGGGCT GCGCTCAATG TCACGCAAGC GAATGGTCAA CCTTTGCCTG CCGTTGATAT TCAAGCCGCG CTGTATTTAC CTGCAGGCCA CACAGGGCCT GCCTTTTTAG GTTATGAGAA CTTCAATGTG ATCATGCGTT GGAATCGCTC TGAGTATTAT GCCATTACAG TGGGGCATCT CGCCGATCGC ATTAATGGTG GCTTACCTTT GACAGTGAGC CCGCCAGAAC AGCCACGCTT AAGTCGCGAG CAAGTTAAGC AACTGCAAGC AAAACTGAAT GAGGCCGGAT TTGATGTTGG CAAGCCAGAT GGTGTGTTGG GGCGTAACTC TGTGGCAGGG CTGCAAGCCT TTCAACGAAG CAAACAGATG ATTGCCGATG GCTTCCCAAG CCCAGAGGTG TTTAGCACTT TAGGGTTATC ACTTTAG
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Protein sequence | MIKIKGLTYL FASIAACVSL SACSSVPAAS ASTKASTNAS SSNASGIAAE ANPMPDISAS VQENAEAFPS CVTGLQARAR TEGLSEATIN STIANLKFVP RVIELDQQQP EFSQTFDNYF SKRATEWRVN EGRRLLQKHS VLLNQLAKEY GVPPQYILSF WGLETNYGSY KGKMSVLNSL ATLACEPRRS NYFTIELMQA LKLKEKYQFD DDTMVGSWAG AMGHTQFMPS AYAKYAVDGD GDGKADLWNS TTDALTSAAN FLQHLGWQRN ERWGREVLLP KDFSYSHLGA KQPLALSEWA ALNVTQANGQ PLPAVDIQAA LYLPAGHTGP AFLGYENFNV IMRWNRSEYY AITVGHLADR INGGLPLTVS PPEQPRLSRE QVKQLQAKLN EAGFDVGKPD GVLGRNSVAG LQAFQRSKQM IADGFPSPEV FSTLGLSL
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