Gene Shew185_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2620 
Symbol 
ID5371437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3126524 
End bp3127390 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID640830844 
Producthypothetical protein 
Protein accessionYP_001366818 
Protein GI153001137 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000591272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATC AAAAAAATGC GGCACAGGTA GGGCTGGGCT TACGGCGAGA AATGCTCAGT 
GAGTTTTGTG AATCGGTGCC AGAAGCGATT AATTTTTTTG AAGTGGCACC AGAAAACTGG
ATGACCTTAG GCGGTAAGTT TGGCCGTCAA TTTCGTGAAC TGACCGAGCA ACATACTTTC
TATTGCCACG GTTTGAGCTT ATCGATTGGT AGCCCAGAGC CCTTAGATCT CGCGTTTGTA
AAAAACATCA AAACCTTTAT GGATTTACAC CAAATCCAAG TCTATTCCGA ACACTTAAGT
TATTGCTCAG GCCAAGGTCA CTTATACGAT CTCATGCCGC TCCCTTTTAC CGACGCAGCG
GTAAAACATG TGGCGGCGCG GGTGAAGCAG GTCGAAGATA TTTTAGAGCG GCCACTTATT
TTAGAAAATG TGTCATTTTA TGCCGCCCCC GGTGCGCACA TGAGCGAACT TGAATTCGTC
AATGCCGTGC TGCAAGAAGC CGATTGTAAG TTGTTACTCG ATGTGAACAA CATCTATGTG
AACTCGATAA ATCATCAATA TGATGCCGAT GCCTTTTTAC AGGCCATGCC GACGGAGCGT
ATCGCTTATC TGCATATCGC TGGGCACTAC AAACAAGCTG AAGATCTGCT CATTGATACC
CATGGCGCTG CAATTAACGA TCCCGTGTGG GCATTGTTGC AACGTTGCTA TGCCTTGCAT
GGGGTAAAGC CGACCTTGCT TGAGCGTGAC TTTAATTTGC CGACAACCGC TGAATTGTTG
CTCGAGCTAA ATCAAATCCA CGCTTATCAA GCAGCGGTCA GTTCCCAAAT TCAAAATAGC
GCTCATGTTG TAAAGAGGAT CGCCTAA
 
Protein sequence
MNDQKNAAQV GLGLRREMLS EFCESVPEAI NFFEVAPENW MTLGGKFGRQ FRELTEQHTF 
YCHGLSLSIG SPEPLDLAFV KNIKTFMDLH QIQVYSEHLS YCSGQGHLYD LMPLPFTDAA
VKHVAARVKQ VEDILERPLI LENVSFYAAP GAHMSELEFV NAVLQEADCK LLLDVNNIYV
NSINHQYDAD AFLQAMPTER IAYLHIAGHY KQAEDLLIDT HGAAINDPVW ALLQRCYALH
GVKPTLLERD FNLPTTAELL LELNQIHAYQ AAVSSQIQNS AHVVKRIA