Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2610 |
Symbol | rlmL |
ID | 5373729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 3114678 |
End bp | 3116807 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830829 |
Product | 23S rRNA m(2)G2445 methyltransferase |
Protein accession | YP_001366808 |
Protein GI | 153001127 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000568014 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAATT TTTTTGCCGC CGCCCCTAAG GGCTTTGAAT ATAGCTTAGC CCAAGAGCTG ACAGAATTTG GTGCGACTGA AGTAAAAGAG AGTGTTGCTG GTGTGTATTT CACGGCCTCC TTAGCTTTAG CGTATCGCAT TACTTTATGG ACACGCTTAG CCAGCCGCAT TGTGTTGGTT ATCTATAAAG GAAGCTGCGA GTCGGCAGAA CAACTCTATA ATGCAGCCTA TTGTGTCGAT TGGCCGGCAC ATTTTTCCAA TAAAAGCACT TTTAGTATCG ATTTCCACGG TACGGGTGGT TTTCTTAATA ATACCCAGTT TGGCGCCTTG AAGATTAAGG ATGCGATTGT TGATCGTTTC CGCGACGATG ATATTGAGCG TCCGAATGTG TCTCGCGTTG ATGCTGAGTT TAAAGTCGAT GCGCATTTCC GTAATGGCGT GATCACGATT GCGATGAACT TCTCGGGTCC ATCGCTTCAT CAACGTGGCT ATCGTTCGAC CACAGGTGAA GCGCCATTGA AGGAAAACTT AGCCGCCAAC ATGCTCGTAC GCAGTGGCTG GCAAGCGGCG CCTTCGACCT TGCTCGATCC TTTCTGTGGT AGCGGTACAG TGCTAATTGA AGCGGCGTTA ATGGCGGCTG ATATTGCCCC TGGTCTGCAA CGTAGTCGTT TTGGTTTTGA ACATTGGCGT CGCCATGATA AAGCCGTGTG GCAAGAAATC GTTGAAGAAG CGAAAGCGCG TGCCTCATTA GGCGTGAAAC GTTGCGAGAT TAAATTCTAC GGTTCTGATA TCGATTCGCG CTTAGTCGCG TTAGCGAAAC GTAATGCCGA AAATGCCGGT GTACTGGAGT TAATCGAGTT TAAAGTTGCG GATGCTTTAA CGATAACGCC GCCTGCGGAA AGTGGCTATT TGATCACGAA CCCACCTTAT GGTGAGCGTT TAGGCAATGT GTCTGAGTTA TTGCAGCTTT ACTATCAGCT GGGCGACAAG TTTAAGAAAG AGTTTGGCGG CTGGAAAGTG GCCATGCTGT GTAGTGATAT CGAACTGGTG TCATCGCTAA AGCTTAAAGC CGATAAACAG ATGAAGATGT TTAACGGCGC ACTTGAATGT GCCTTTAATA TCTATACCTT ACATGCCAAC AGTACTCGCC GTGATACGCC AGTGCTGCCA GATGGCGTCG ACATTGCCGA TATCGCTCCA GCTTTTGCTA ACCGCATTAA GAAGAATGCC AAGTTATTAG AGAAATGGGC GAAGAAAGAA GGCATCGATA GCTATCGTAT TTACGATGCC GACATTCCTG AATATAACGT CGCAGTAGAT AAGTATTTAG ATTACGTGAT TATTCAAGAG TATATGGCGC CAGCGACCAT ACCTGAAGCC GTGACTAAGC GTCGTTTAAG TGATGTGTTA TTAGCACTGC CATCGGCCAT TGGCATCAAT CCTAACAAGA TGATCATGAA GACCCGTGAG CGTCAAAAGG GCACGAGTCA ATATCAAAAG CTGGATGAGC GCAAGTTAGA GCTTATCACT ACCGAATATG GCGCTAAGTT CAAGTTGAAC TTAACCGGTT ATTTGGATAC AGGTTTATTC CTCGATCACA GATTGACACG TCGTTTAGTC GGTCAAAAAT CTAAAGGCCG CCGCGTACTG AACTTGTTCT CTTACACAGG TTCTGCTTCT GTACACGCAG CGCTTGGCGG TGCTAAGTCG GTAACGACAG TTGATATGTC TAATACCTAT ATCGCTTGGG CGAAGGACAA CTTTGCGCTC AATGGCCTGC AAGGTAAGCA GTATGAGTTT GTTCAATCTG ACTGCATGCA GTGGATTAGG GATTGTAATG AACAGTACGA TCTGATTTTT ATCGATCCGC CGACCTTCTC AAACTCTAAG CGCATGGAAG ATTCGTTTGA TGTGCAACGG GATCATGTGA ATTTACTGTC ATCCTTAGTG AAACTGCTCA GCCCAACGGG CGAGCTAGTG TTCTCTAACA ATAAACGTAA GTTTAAGATG GACATAGAGA CGCTGACAAA GATGAACATT AATGTGACAA ACATTGATGA CGTGACTTTA CCTATGGACT ACAAACGTAA TCCACATATC CATAACACCT GGCTTATCAC CCATGCCTGA
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Protein sequence | MLNFFAAAPK GFEYSLAQEL TEFGATEVKE SVAGVYFTAS LALAYRITLW TRLASRIVLV IYKGSCESAE QLYNAAYCVD WPAHFSNKST FSIDFHGTGG FLNNTQFGAL KIKDAIVDRF RDDDIERPNV SRVDAEFKVD AHFRNGVITI AMNFSGPSLH QRGYRSTTGE APLKENLAAN MLVRSGWQAA PSTLLDPFCG SGTVLIEAAL MAADIAPGLQ RSRFGFEHWR RHDKAVWQEI VEEAKARASL GVKRCEIKFY GSDIDSRLVA LAKRNAENAG VLELIEFKVA DALTITPPAE SGYLITNPPY GERLGNVSEL LQLYYQLGDK FKKEFGGWKV AMLCSDIELV SSLKLKADKQ MKMFNGALEC AFNIYTLHAN STRRDTPVLP DGVDIADIAP AFANRIKKNA KLLEKWAKKE GIDSYRIYDA DIPEYNVAVD KYLDYVIIQE YMAPATIPEA VTKRRLSDVL LALPSAIGIN PNKMIMKTRE RQKGTSQYQK LDERKLELIT TEYGAKFKLN LTGYLDTGLF LDHRLTRRLV GQKSKGRRVL NLFSYTGSAS VHAALGGAKS VTTVDMSNTY IAWAKDNFAL NGLQGKQYEF VQSDCMQWIR DCNEQYDLIF IDPPTFSNSK RMEDSFDVQR DHVNLLSSLV KLLSPTGELV FSNNKRKFKM DIETLTKMNI NVTNIDDVTL PMDYKRNPHI HNTWLITHA
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