Gene Shew185_2600 details

Gene Information

• Locus tag: Shew185_2600
• ID: 5372925
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 3101546
• End bp: 3102190
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640830816
• Product: response regulator
• Protein accession: YP_001366798
• Protein GI: 153001117
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000388579
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATTTCGA TATATTTGGT TGACGATCAT GAGCTTGTGA GAACTGGGAT CCGCCGCATC 
TTGGAAGATG AACGTGGGAT CAAAGTGGTG GGCGAAGCCC CTGATGGTGA GACTGCGGTG 
CAGTGGGCTC GCCAAAACGA AGCCGATGTG ATCTTAATGG ACATGAATAT GCCTGGGATG 
GGCGGACTGG AAGCCACTCG AAAAATTCTG CGTTATCAAC CCCATGCTAA AATTATTGTG 
TTGACTGTGC ACACGGAAGA TCCATTTCCG AGCAAGGTCA TGCAGGCTGG CGCTTCGGGT 
TATTTGACGA AAGGGGCGAC GCCGCCGGAA GTATTGCAGG CAATACGTCA GGTTTCTCGC 
GGTCAGCGTT ATTTATCCCC TGAAATTGCC CAACAGATGG CGCTGAGTCA GTTTAATCCC 
GCCGATGAAA ACCCGTTTAA GTCTTTGTCT GAACGTGAGT TACAGATCAT GTTGATGATC 
ACCAACGGCG AGAAGGTAAA CGATATTTCT GAGCAGCTGA ACTTGAGCCC TAAAACGGTT 
AACAGCTACC GTTACCGCCT ATTTGCCAAA CTGGGGATCA GTGGTGATGT CGAGCTAACG 
CGGTTAGCTA TTCGCTATAA AATGTTGGAT GCTGGCCATT TTTAA 

 

Protein sequence

MISIYLVDDH ELVRTGIRRI LEDERGIKVV GEAPDGETAV QWARQNEADV ILMDMNMPGM 
GGLEATRKIL RYQPHAKIIV LTVHTEDPFP SKVMQAGASG YLTKGATPPE VLQAIRQVSR 
GQRYLSPEIA QQMALSQFNP ADENPFKSLS ERELQIMLMI TNGEKVNDIS EQLNLSPKTV 
NSYRYRLFAK LGISGDVELT RLAIRYKMLD AGHF