Gene Shew185_2589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2589 
Symbol 
ID5372901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3088229 
End bp3089326 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content45% 
IMG OID640830801 
ProductNlpB/DapX family lipoprotein 
Protein accessionYP_001366787 
Protein GI153001106 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3317] Uncharacterized lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000786749 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA AAGTCACCCC ACTGATCTTA GTTGCTGCCG TTGCAGCCTG TAGTTCGCCA 
CTCGATCGCC GTCAAGCGAA TGGTACTGAA GACTATGTTC AGGCTGAGCA AGCGCCTTTA
CTTAAGATCC CAGCCGGATT AAAAACACCG CCCTACAATA AAGAATTTGA TGTGCCAGCA
TTGGGCCCTA AAGCCAATGC GACTGTCTAC GGTAAAAATT TGGATATCCG TCCGCCACTG
CAAGTACTGC CTATGGCTGA AGGTACTCAC GTGGAAGAGG GCAGCGACAA CATTAAAATC
GTGGTCGAAT CTATCGACAA TACAGTGGAC TTGAAACAAG AAATCTTTAG CAACTTAGAT
GGTTTCTTGG CCCAAAAAGG TATCGCTGTT CGTAGCCGTG ATTTTGATAA AGGCAACATA
GAAACCGATT GGATCGAAAG TCGCGAAGTA ATCGAATCAA ACATGTGGGG TTCAGATAAA
GTTTATCTGC TGCGCCAACG TTACCGTTTC GATGTGGAAA CACGTCCACA TGGCCGCACT
GCCAATATCG TTATTCACTT AGTTGAACAC GAAGAGTTTT ACGACGATAA AGCACAAGAC
GTGTTATTAA GCGGCGAAGA TAAGCAAAGA TACACGATTG ATATGCTGAA CAGTGCGATT
GCCTACATCA GCGTTAAACG TGACCAATCT ATTCAAGCGA ATCGTTTGAA GCAAACCTTA
GGTATCAATG TTGACTTAGT CACGCCAGAA GAAGGCAAAG CCTACTGGTC TGCTAAAGCC
CCGTACAAAC AAGTGTGGGA TCGTCTGCGT ATCGTGCTGC CAGAAATGGG CTTCGAAATT
GCCGATATGG ATAGCGCGAA AGGATTGTAC TTTATCAAGT TTGACGATAA CTCAGGTTTC
TGGAGTTCAT TGTGGGGCGA AGATAAGTTA GCGCTAAAAG AAGGCAGCTA CCGTTTACTG
CTTGAAGATG GCGATACGCC TGAAGACACT AAGATCTTCC TCCGCGATGC TGAAGATCAG
CCATTGAGCG ATGAAGTCGT TACCAATGTG TATCAGTCAC TGTCAAACCT GATGAAAGAA
GAACGCAAAC TGCGTTAA
 
Protein sequence
MLKKVTPLIL VAAVAACSSP LDRRQANGTE DYVQAEQAPL LKIPAGLKTP PYNKEFDVPA 
LGPKANATVY GKNLDIRPPL QVLPMAEGTH VEEGSDNIKI VVESIDNTVD LKQEIFSNLD
GFLAQKGIAV RSRDFDKGNI ETDWIESREV IESNMWGSDK VYLLRQRYRF DVETRPHGRT
ANIVIHLVEH EEFYDDKAQD VLLSGEDKQR YTIDMLNSAI AYISVKRDQS IQANRLKQTL
GINVDLVTPE EGKAYWSAKA PYKQVWDRLR IVLPEMGFEI ADMDSAKGLY FIKFDDNSGF
WSSLWGEDKL ALKEGSYRLL LEDGDTPEDT KIFLRDAEDQ PLSDEVVTNV YQSLSNLMKE
ERKLR