| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2588 |
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| Symbol | |
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| ID | 5372900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3086777 |
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| End bp | 3087859 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640830800 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001366786 |
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| Protein GI | 153001105 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000707575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TTATTCTAAT AATCGCCCTA TTGGCCGCGG CATGGTTTGG ATATCAAGCC
ATGCAACCGC AAGAGATTGC CACCGCGCAA ATGAAACTAA TGCCTAACGT GGTGATTGCC
ACCGCCGCCA TGGCACCTAT TCGCGATGAA GTGGAAGCTA TCGGCACCAA TAAAGCCGCA
GAATCTGTGA CCATAACCCC TAAAGTCACT GACATGGTGA CAGCACTTAA GTTTGATGAT
GGCGACATAG TCAAAAAGGG TGACTTGCTA GTCCAACTGC AAAATGCCGA GCAGATCGCT
AAGGTTAAAG CCGCGCAAGT CAAAGTCAGT GATAATCAAC GTGAATTCAA CCGTATCAGT
TCGTTAGTCA CCAGCCGCAC TGTGGCAGAG TTAGAACGCG ACAGATTACA AACCCTTATC
GATACCACCC GCGCAGAGCT TGAACAGGCG CAAGCATCAC TCAATGATCG CAGTATTCTG
GCGCCTTTTA ATGGCCGTTT AGGTTTACGC CAAATCAGTG TCGGCAGCCT AGTGTCGCCC
GGCACTGCGA TCACCACCTT GGATGATATC TCTAAGATTA AACTCGATTT TTCAGTGCCT
GAGCGTTTTA TTCAAGATTT AGCCCCAGGT AAGAAAGTTG AAGCCAAAGC TGTGGCCTTT
CCTGATTTTA CCTTCAAAGG CGTGGTGACA TCGATTGATA GCCGCGTAAA CCCAACGACG
CGCACTGTGA TTGTCCGTGC CGAAATCCCC AATCCTGAGC TGCGTTTATT ACCGGGCATG
TTGATGAAGG TCAAACTCAT CAAACGTAGC CGCGAAGCCT TGATGTTGCC AGAATCTGCC
ATTATCCCAA TCCAAAATGA TCACTTTGTT TACAGCGTTA ATGCCGACAA AGTGATTGAG
CGTAAACAAG TCACTATAGG GATTCGTACC CGTGGTTGGG TGGAAATCTT AGACGGTTTA
GCTTTGGGTG AAAACGTGGT TATCCGTGGC TTATTGAAAG TCCATCCTGG CGATAAAGTG
CAAACGGAGT TCGCGGAAAA GTTTAGTTAT CTTGCGGATA CGAGCGCGGA GCCAAGTGTA
TGA
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| Protein sequence | MKKIILIIAL LAAAWFGYQA MQPQEIATAQ MKLMPNVVIA TAAMAPIRDE VEAIGTNKAA
ESVTITPKVT DMVTALKFDD GDIVKKGDLL VQLQNAEQIA KVKAAQVKVS DNQREFNRIS
SLVTSRTVAE LERDRLQTLI DTTRAELEQA QASLNDRSIL APFNGRLGLR QISVGSLVSP
GTAITTLDDI SKIKLDFSVP ERFIQDLAPG KKVEAKAVAF PDFTFKGVVT SIDSRVNPTT
RTVIVRAEIP NPELRLLPGM LMKVKLIKRS REALMLPESA IIPIQNDHFV YSVNADKVIE
RKQVTIGIRT RGWVEILDGL ALGENVVIRG LLKVHPGDKV QTEFAEKFSY LADTSAEPSV
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