| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2587 |
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| Symbol | |
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| ID | 5372881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 3083685 |
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| End bp | 3086780 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640830799 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_001366785 |
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| Protein GI | 153001104 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000412735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCTCA CTGATCTCTC AGTAAAACGT CCCGTATTTG CCTCAGTGAT CAGCTTGCTG
CTAGTCGCTT TCGGGCTTGT CTCCTTTGAT AAATTGCCCC TGCGTGAATA CCCAAACATC
GATCCTCCTG TGGTGTCTAT CGACACTAAC TATCGCGGCG CCAGTGCCGC TGTGGTGGAA
AGCCGCATTA CCCAATTGAT TGAAGACAGG ATTAGCGGCG TCGAAGGCAT TCGGCACGTG
AGCTCATCGA GCAGTGATGG CCGTTCATCC GTCACCTTAG AGTTTGATAT TAGCCGTAAT
ATTGAAGATG CCGCTAACGA TGTCCGCGAC CGTATTTCTG GCTTACTCGA CAATTTACCC
GAGGAAGCCG ATCCCCCAGA AGTGCAAAAA GCCAATGGCG GCGATGAAGT GATCATGTGG
CTCAATTTGG TGTCGGATCA AATGACCACC CTCGAATTGA CCGATTACAC CAACCGTTAT
TTAGCCGACC GCTTTTCTGT GGTCGATGGC GTGGCGCGAA TGCGTATTGG TGGCGGTAAA
GTGTATGCGA TGCGGATATG GCTAGACAGA CAAGCCTTGG CATCGCGCAG TTTAACGGTT
GCCGATGTAG AGGCTGCGCT TAGAGCCGAG AACGTCGAGT TACCCGCAGG TTCGATTGAA
TCCAAGGAGC GGCATTTTAC GGTGAGGCTC GAGCGGGGTT ATCGCACCGC TGAAGATTTC
GCGAACTTAG TGATCACCCA AGGGGAAGAC GGTTACTTAG TTAAATTGGG TGATGTCGCG
CGGGTGGAAA TTGGCTCTGA AGAAGAGCGG ATTATGTTCC GTGGTAACAA AGAGGCGATG
ATAGGGCTAG GTGTGTCTAA GCAGTCAACC GCCAATACCT TGGAAGTGGC GCGCGCGGTG
AATGCGCTGG TTGATAAAAT TAACCCAACC TTGCCAGCGG GCATGTCCAT TAAGCGCAGC
TATGATAGCT CAGTGTTCAT CGAAGCCTCG ATTAAAGAAG TGTACCAAAC CCTGTTCACT
GCGATGGTCT TAGTGATTAT CGTGATTTAT CTGTTCCTTG GCAGTGTGCG CGCCATGTTG
ATCCCCGCTA TCACTGTGCC TGTATCCTTG CTCGGCACCT TTATTGTGCT GTATGCGCTT
GGCTATACCA TTAACCTCTT GACCTTGTTG GCGATGATCC TCGCCATCGG CATGGTGGTG
GACGATGCGA TTGTGATGCT GGAAAACATC CATAGACGTA TCGAAGAAGG GGACTCACCG
CTCAAAGCCG CTTTTCTCGG TGCGCGTGAA GTGGCCTTTG CGGTCATCGC CACCACCTTA
GTCTTGGTAG CGGTGTTTAT GCCTATCACT TTCCTTGAGG GCGACTTAGG TAAGCTATTC
AAAGAGTTTG CTGTGACCAT GAGTGCAGCG GTGCTGTTTT CAAGCATAGT CGCGCTAACG
CTCACACCTA TGATGTGTTC TAAGTTACTC AAGCCGAGCT CGCAGGATTC TTGGTTGGTA
CGTAAGGTCG ACGGCATCAT GACCAAAGTG TCAAACCGCT ATCAATTGTC GTTAAAATCC
GCCATGGCTC ACCCGTTATT GATGTCGGTT TTGGTGTTGA TCGCGTTAGG CTCTAGCGCC
TATTTGGTCG AAAAAGTGCC GCAGGAATTT GCGCCGCAGG AAGACCGAGG CTCGTTATTC
TTGATGGTCA ACGGACCGCA AGGCGCGAGT TACGAATACA TAGAATCCTA CATGAATGAG
GTGGAAAACC GTTTGATGCC GCTGGTCGAC ACGGGTGATA TCAAACGTCT GCTGATCCGT
GCTCCCCGTG GCTTTGGCCG TTCGGCGGAT TTCTCTAACG GTATGGCCAT TGTCGTGCTG
GAAGATTGGG GTAAACGTCG CCCGGTGAAA GAAGTGATCG CAGATATTAA CAAACGTCTT
GCCGATCTCG CTGGGGTGCA AGCGTTTCCT GTGATGCGCC AAGCCTTTGG CCGTGGCGTC
GGTAAACCTG TGCAGTTTGT AATTGGCGGC CCAAGCTACG AAGAGCTGGC CCGCTGGCGC
GATATCATGA TGCAAAAGGC GGCACAGAAT CCTAAATTAC TTGGCTTAGA TCACGACTAT
AAAGAGACTA AGCCTCAGCT TCGCGTCGTC ATCGACAGAG ACAGAGCCGC GAGCCTTGGG
GTATCGATTT CAAATATTGG CCGTACGCTG GAATCCATGC TGGGCTCACG CTTAGTCACG
ACCTTTATGC GTGACGGTGA AGAATACGAT GTGATCATTG AAGGCGAGCG CGGTAATCAA
AATACCGCAG CGGATCTGCA AAACATCTAC GTGCGTTCCG AGCGGACTCA AGAACTTATC
CCGCTGTCGA ACTTAGTGAC GGTGGAAGAG TTTGCCGACG CCAGTTCGCT TAACCGTTAC
AACCGTATGC GCGCGATCAC CATAGAAGCC AGTTTAGAAG ATGGTTATAG CCTAGGTGAA
GCCCTTGATT ATATGAATCA ATTGGCGCGT GCTTATTTAC CTGCAGAAGC GGTCATTAGC
TACAAGGGCC AATCCCTCGA TTATCAAGAG TCGGGTAGCT CTATGTACTT CGTGTTCTTG
CTCGCGCTGG GGATTGTGTT CCTCGTGCTC GCGGCGCAGT TCGAGAGTTA CATTCATCCT
ATGGTGATAA TGCTGACTGT ACCGCTGGCG ACCGTGGGCG CGTTAATTGG TTTGTGGCTC
ACGGGGCAGA GTCTTAATAT TTACAGTCAG ATAGGTATTA TTATGCTGGT CGGGTTGGCG
GCGAAAAACG GCATCTTGAT TGTCGAGTTT GCTAACCAAT TGCGGGATAA AGGCGTTGAC
TTTGACAAGG CGATTATCCA AGCCTCAGCG CAGCGTTTAC GACCCATTCT CATGACTGGC
ATCACTACCG CCGCTGGCGC CGTGCCTTTG GTCATGGCCG CAGGCGCGGG TGCTGAAACC
CGTATCGTGA TTGGTGTAGT CGTGTTGTCG GGGATTTTAT TGGCAACCCT ATTCACTATC
TTCGTGATCC CCGCCGCTTA TGGACTCTTT GCCCGTAACA GCGGATCGCC CGAAGCCATA
GCCCAACAGT TAGAAAAAGA ATTAGCCGAA GACTAA
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| Protein sequence | MILTDLSVKR PVFASVISLL LVAFGLVSFD KLPLREYPNI DPPVVSIDTN YRGASAAVVE
SRITQLIEDR ISGVEGIRHV SSSSSDGRSS VTLEFDISRN IEDAANDVRD RISGLLDNLP
EEADPPEVQK ANGGDEVIMW LNLVSDQMTT LELTDYTNRY LADRFSVVDG VARMRIGGGK
VYAMRIWLDR QALASRSLTV ADVEAALRAE NVELPAGSIE SKERHFTVRL ERGYRTAEDF
ANLVITQGED GYLVKLGDVA RVEIGSEEER IMFRGNKEAM IGLGVSKQST ANTLEVARAV
NALVDKINPT LPAGMSIKRS YDSSVFIEAS IKEVYQTLFT AMVLVIIVIY LFLGSVRAML
IPAITVPVSL LGTFIVLYAL GYTINLLTLL AMILAIGMVV DDAIVMLENI HRRIEEGDSP
LKAAFLGARE VAFAVIATTL VLVAVFMPIT FLEGDLGKLF KEFAVTMSAA VLFSSIVALT
LTPMMCSKLL KPSSQDSWLV RKVDGIMTKV SNRYQLSLKS AMAHPLLMSV LVLIALGSSA
YLVEKVPQEF APQEDRGSLF LMVNGPQGAS YEYIESYMNE VENRLMPLVD TGDIKRLLIR
APRGFGRSAD FSNGMAIVVL EDWGKRRPVK EVIADINKRL ADLAGVQAFP VMRQAFGRGV
GKPVQFVIGG PSYEELARWR DIMMQKAAQN PKLLGLDHDY KETKPQLRVV IDRDRAASLG
VSISNIGRTL ESMLGSRLVT TFMRDGEEYD VIIEGERGNQ NTAADLQNIY VRSERTQELI
PLSNLVTVEE FADASSLNRY NRMRAITIEA SLEDGYSLGE ALDYMNQLAR AYLPAEAVIS
YKGQSLDYQE SGSSMYFVFL LALGIVFLVL AAQFESYIHP MVIMLTVPLA TVGALIGLWL
TGQSLNIYSQ IGIIMLVGLA AKNGILIVEF ANQLRDKGVD FDKAIIQASA QRLRPILMTG
ITTAAGAVPL VMAAGAGAET RIVIGVVVLS GILLATLFTI FVIPAAYGLF ARNSGSPEAI
AQQLEKELAE D
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