Gene Shew185_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2550 
Symbol 
ID5373118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp3049435 
End bp3050871 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content45% 
IMG OID640830762 
Productdisulphide bond formation protein DsbB 
Protein accessionYP_001366749 
Protein GI153001068 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAGC ATTTATTTAA TAAGCTAGCT TCATTTGCTT CTATTATTAT CATGGCATTA 
CCCGTTGGTA TTGCTTGTTT TATTTTCGGA TTTATTTATT TAGATAACCC TTGCGCATTT
TGCTGGCAAG AACGAACAGC CATGATTTTA GTAGCGCTAA CGGCTCTCTA TATCGTTCGC
TTTGGCCTAA AACCCAAATA TATCGCAGCG CTAGTTTGGC TTGGAATATA TGGGGCTTTT
ATGGCCTCAG TTCATACATC TATCAATTTA GGTAGCGATA TTGGTCAAGG TTTCTCACTG
AAAATCATGG GAGCTCATAC CTATACTTGG GCGTTATTCG TATTTGTCAC TGTCCTTATT
GTGGTGGCAT TACTCATGCT TACACTTGGC AATAAGTTCC CGAATAACGG CTACGGCAAG
CAACCACTCG ATACGCTCCC TAAGGTTGCC TGTTGGATAT TCCTGGTCGT GATCAGTGGC
AATATTGTCC AAGCCTTTAC ACAAACAGGT CCTCTTCCCT TCGTAGGTCA AGATAGCCCT
GGTCGAGTCT CTTTTAACCC TCAATACATG AGTTGGGAAC TCGACCACTG GCCAACTTAT
GCACCTAATG CCCGCGGTGC TTACGCTATT GATAATCCAG AGATTGAATC TTGGCAACCA
ACCGAAGCAC AATTTGCTGA TGCACCTAGA GTTAAGTTAG TCGCAGAACA AGTGCTGCCA
TCGGAGATAA GCGGACGCGT GACTGCCATT GACTATCAGG CTGAAGCAGG AATTTATGCC
CTGACGACGA TCGATAATTG GGTCTATATC CTCGATAAGC AAATGCAAAT CCTCAGCAAG
GCGCAAATTG ATGGCATGTA TATGCTGCAT ATTGAAACGC TTCATGGGGT TGCCTTTACT
TCAACTAACA GCTTGCTGGT GATGGGATTC AATAAAGCAT GGGTTGAATT AACCTTAGAT
CCTACACAAA ACTGGGAAAT GAACTATCGC CGTTTTAACC AAAGCAGCGA TGGTATAGGC
GAAATCGCTC GCGGCCAGTT CAGCACGGTA CGCGCTAAAA CCAGTTACAG CTTGGCATTG
GGTTACAGCA GCACACTCGA ACAATTTGTC ACTGTGACGA CCCGCGATGC GCTCAACGAA
CACTTAGTGT TATCACGCTT TGACCGCACA GATATGACGC TCTCTGCCGA ATCTAATCTG
CAAGGACTCC CTGCATTACC ACAGGTAACA GGTATCAGCG TTCAAGGTGA ACAAGCATGG
CTCCTCAACA ACGACGGTAG CGAGGTATTA AAACTCAATC TGCTCACTGG TGAAGTAGCA
CCTATGGCCA AACTTGCAGG CACAACCAAT CCGCAAGGAC TATTAGTACA GGATGGCAAG
CTGTTGACCA TCAGCCAGAT CAATGGGCAA AACCTACTAC AAACCTATGT GATGTAA
 
Protein sequence
MKEHLFNKLA SFASIIIMAL PVGIACFIFG FIYLDNPCAF CWQERTAMIL VALTALYIVR 
FGLKPKYIAA LVWLGIYGAF MASVHTSINL GSDIGQGFSL KIMGAHTYTW ALFVFVTVLI
VVALLMLTLG NKFPNNGYGK QPLDTLPKVA CWIFLVVISG NIVQAFTQTG PLPFVGQDSP
GRVSFNPQYM SWELDHWPTY APNARGAYAI DNPEIESWQP TEAQFADAPR VKLVAEQVLP
SEISGRVTAI DYQAEAGIYA LTTIDNWVYI LDKQMQILSK AQIDGMYMLH IETLHGVAFT
STNSLLVMGF NKAWVELTLD PTQNWEMNYR RFNQSSDGIG EIARGQFSTV RAKTSYSLAL
GYSSTLEQFV TVTTRDALNE HLVLSRFDRT DMTLSAESNL QGLPALPQVT GISVQGEQAW
LLNNDGSEVL KLNLLTGEVA PMAKLAGTTN PQGLLVQDGK LLTISQINGQ NLLQTYVM