| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2514 |
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| Symbol | |
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| ID | 5371561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 3002409 |
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| End bp | 3003473 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830727 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001366714 |
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| Protein GI | 153001033 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000208657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGT CAAACATTGC TAAATTCGCC CTACCCCTGC TAATGATTTC AATGCTAGCA
GCCTGTGGTA AGGAAGAAGT GGCCAAAAAA GAAGAAAAAT ATGCCATTCC CGTCGAAACC
ACCACAGTGA TGCAAGGAAA CGTTTCATCT TTCTACAGCA CAACAGCCAC CTTAGAAGCA
CCTCAAGAAG CCAATGTCGT CAGCCGCATT TCTGGACTCA TTGAATCACT TGCCGTTGAA
GAAGGTGACC GCGTACAAAA GGGCCAAGTG CTCGCCGTTA TCGATGCCAA AAGACAGCAA
TACGATTTAG ACCGCTCAGA AGCCGAAGTT AAAATCATTG AGCAGGAATT GAATCGTCTG
AAGAAAATGG GCAACAAAGA ATTTATCAGC GCAGATTCGA TGGCCAAACT TGAGTATAAC
TTGCAAGCCG CCATCGCCAA GAAAGATCTT GCCGAGCTAC AAGTCAGAGA AAGCCGCGTA
CTGTCCCCTA TTAGCGGCGT CGTCGCTAAA CGTTATGTGA AAGCAGGCAA CATGGCGAAG
GAATTTGGCG ACTTGTTTTA TATCGTTAAT CAAGATGAAC TCCACGGTAT AGTCCATCTG
CCAGAGCAAC AACTTGCCAG CTTAAGACTC GGCCAAGAAG CACAAGTATT CAGCAATCAA
CAAAGTAAAA ATGCTATCCA TGCCAAAGTG CTGCGGATAA GCCCGATTGT TGACCCACAA
AGCGGCACGT TTAAAGTGAC ATTAGCCGTA CCGAATCAAG AGGCGCGCCT AAAAGCAGGC
ATGTTTACCC GTGTTGAGCT TAAGTATGAC ACCCATGAAA ACGTGATTAC CGTTCCCTAT
AGCGCCCTGA TTAATCAAGA TAACAGGCAA GCTCTGTATG TTATCGATGG CAATAATGCT
AACCGCCGTG AAGTCGAAAT TGGCTACCGT GAAGGTGACT CTGTAGAAGT GATTGCAGGC
ATTAACCCAG GTGAACAAGT CGTGACCCGT GGCCAGCAAA ACTTGAAAGA CCAATCCTTA
GTCGAAGTGA TCACCCCACT CGATCTTGCT TCCGCTAAGA ACTGA
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| Protein sequence | MEKSNIAKFA LPLLMISMLA ACGKEEVAKK EEKYAIPVET TTVMQGNVSS FYSTTATLEA
PQEANVVSRI SGLIESLAVE EGDRVQKGQV LAVIDAKRQQ YDLDRSEAEV KIIEQELNRL
KKMGNKEFIS ADSMAKLEYN LQAAIAKKDL AELQVRESRV LSPISGVVAK RYVKAGNMAK
EFGDLFYIVN QDELHGIVHL PEQQLASLRL GQEAQVFSNQ QSKNAIHAKV LRISPIVDPQ
SGTFKVTLAV PNQEARLKAG MFTRVELKYD THENVITVPY SALINQDNRQ ALYVIDGNNA
NRREVEIGYR EGDSVEVIAG INPGEQVVTR GQQNLKDQSL VEVITPLDLA SAKN
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