Gene Shew185_2488 details

Gene Information

• Locus tag: Shew185_2488
• ID: 5370294
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: +
• Start bp: 2969876
• End bp: 2970655
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640830701
• Product: hypothetical protein
• Protein accession: YP_001366688
• Protein GI: 153001007

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.216175
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATTCA CCTTGGTTCT GATCCTCATC GGTGCGCTTT TACTGCTTGT TATCGGAATT 
AACGTATTAC AACAACAAAA AGAACGCGTA GAGGCTGAGC GGCGCATTGA ATTTGCCCGT 
CAAAGAGCAA TTATCGATGA AACCGAAGCT GTGTTATCAA ACACAGGGAT GATGCCTTGT 
AGCACGAATA TTGTGTTGGT TTTGTACCGT CGCGTGCAAG ATGCCTTGCA GGCTGCGACA 
GCTATTAGTA ATAGCCAACA ACAGTCTGAT TACCAGCGCC GACTAGCCGA TATCAACAAT 
CAAATAACAA CCTTACAGTC TGGTCAACCT CAATCACCAC CGATTGAGAA TTTCAGACTA 
CCCGATAACG ACAAACAAAT TTTAGCGCTA GTGCAAACCT TGAAAAAGCT CAAGGCTATA 
CTCAGAGCCG AACATAATAA AGGGAAAGTC GACCCAAGCA TTTTTGCTCA GGAAGAAAGT 
CGTATCGACA GTTTACAGCT CAGGATCAAT GTTGATTCCA TGCTTTCCCG TGCCAGAGCG 
GCCAGTTTTA TGAAGCAATA TGGTTCATCA AAACAAATGG TAACTAAAGC ACTATCGACA 
TTGCACGCGA TTAAGGCACA AACGCCTAAT GACCCTTTCA TTGGTCGTAA AGTGGATGAG 
GCTAAACAAT TGCTTGATGA GATTATGGGC GCGCAAAAAC AATCTGAACC CAGTGCACCT 
AGACCTAAAA ATGAAGAAGA TGATATCGAC ATGCTGTTTC AACCGAAAAA GAAATGGTGA 

 

Protein sequence

MSFTLVLILI GALLLLVIGI NVLQQQKERV EAERRIEFAR QRAIIDETEA VLSNTGMMPC 
STNIVLVLYR RVQDALQAAT AISNSQQQSD YQRRLADINN QITTLQSGQP QSPPIENFRL 
PDNDKQILAL VQTLKKLKAI LRAEHNKGKV DPSIFAQEES RIDSLQLRIN VDSMLSRARA 
ASFMKQYGSS KQMVTKALST LHAIKAQTPN DPFIGRKVDE AKQLLDEIMG AQKQSEPSAP 
RPKNEEDDID MLFQPKKKW