Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2468 |
Symbol | |
ID | 5371954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2943105 |
End bp | 2945330 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830681 |
Product | isocitrate dehydrogenase, NADP-dependent |
Protein accession | YP_001366668 |
Protein GI | 153000987 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00290005 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC ACCCTCTCAC TCTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA ACCCGTGATA TCTCGTTATC GGGCCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT GAACTGCAGC AAAAAGGTTA CAACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT GAAAAGTCAA TTAAAACACG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTA CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCAC ACGTTGCTCA CATGACTGAC GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC GTGCTGACGC AAAAAGATGG CCAAGAAGTG GTGCTGAAAT CGGGTCTTAA GCTGCTGGCT GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTG TTTGACAAGC ATCCGGCGCT TTTTGCTGAA TTAGGCGTAG ATGTTAACAA CGGTTTTGGT GATGTTTATG CCAAAATAGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC ACCAACTTAC ACGTGCCAAG CGACATCATT ATCGATGCGT CTATGCCTGC TGCGATTCGT TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC TATGATCCCA GATCGTTGCT ATGCCGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA GAGTACGGCA GCCACGATAA GACCTTTGAA ATACCTGCTG ACGGTGTGGT CAACGTTGTC GATGCAAGTG GTAAGGTATT GATGAGCCAT AACGTAGAAG CGGGCGATAT CTGGAGAATG TGCCAAGTTA AAGACGCACC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT TTAAGCAATA CTCCTGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCGCAAATC ATTGCAAAAG TGCAGCAGTA TCTGCCAGAA CATGACACTG ATGGCTTAGA TATCAGCATC ATGTCTCCAG AAGACGCGAC GCGTTTGTCT TTGGCTCGCA TCAAAGAAGG CAAAGATACC ATTTCAGTTA CGGGTAACGT TTTACGTGAC TACCTGACTG ACTTGTTCCC CATCCTTGAG CTAGGCACCA GTGCCAAAAT GCTGTCAATC GTTCCGTTAA TGAACGGCGG CGGTCTATTT GAAACAGGTG CGGGCGGTAG TGCGCCTAAG CACGTGCAAC AGGTTGAGAA AGAAGGTCAC TTACGTTGGG ATTCACTCGG TGAATTCTTG GCTCTGGCGG CGTCTCTTGA GCATTTAAGC CAAACTGTCG GTAATCCAAA AGCCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGC CAATTCTTAG ATAGCAACAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA CAACCGTGGC AGCCATTTCT ACTTAGCCAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG CAGTTACAAG CTCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA GCTGTTGATT GCTTAA
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Protein sequence | MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYNIP HYPDEPKTDA EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHPALFAE LGVDVNNGFG DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE EYGSHDKTFE IPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL DAAKAEKAMR PSETLNKLLI A
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