Gene Shew185_2468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2468 
Symbol 
ID5371954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2943105 
End bp2945330 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content48% 
IMG OID640830681 
Productisocitrate dehydrogenase, NADP-dependent 
Protein accessionYP_001366668 
Protein GI153000987 
COG category[C] Energy production and conversion 
COG ID[COG2838] Monomeric isocitrate dehydrogenase 
TIGRFAM ID[TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00290005 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATA ACTCATCAAC AATTATTTAC ACTGAAACAG ACGAAGCGCC AGCACTGGCC 
ACCCTCTCAC TCTTACCTAT TATCAGAACG TTTACCGACG CCGCGGGCGT TGCGGTTGAA
ACCCGTGATA TCTCGTTATC GGGCCGTATT ATTGCCAGTT TCCCTGAGCA ACTGACCGAA
GCACAAAAGA TTGGCGATCA TCTGACTGAG CTTGGCGAGT TAGCGAATCA GCCAGAAGCG
AACATCATCA AGTTACCGAA TATCAGTGCT TCGATTCCAC AATTAAAAGC CTGTATCCTT
GAACTGCAGC AAAAAGGTTA CAACATCCCT CACTATCCGG ATGAGCCAAA AACCGACGCT
GAAAAGTCAA TTAAAACACG TTACGACAAG ATTAAAGGCA GTGCGGTAAA CCCAGTACTA
CGTGAAGGTA ACTCAGATCG CCGTGCCCCA TTATCGGTGA AAAACTTCGC CAAGAAAAAT
CCGCATTCAA TGGGTAAATG GGCTACAGAT TCTAAGTCAC ACGTTGCTCA CATGACTGAC
GGCGATTTCT ACGGCAGCGA GCAGTCAGTG ACTTTATCTG ATGCGGGCAG CGTGAATATC
GTGCTGACGC AAAAAGATGG CCAAGAAGTG GTGCTGAAAT CGGGTCTTAA GCTGCTGGCT
GGCGAAATTA TCGATGCTGC GGTATTGAGT AAAAAAGCCT TAGTGAGCTT CTATGAGCGT
GAAATCGAAA ACGCCAAAGC AGAAGATGTG CTGTTATCGC TGCATCTGAA AGCCACTATG
ATGAAAGTGT CTGATCCTAT TATGTTTGGT CACGCTGTGA AGGTATTCTT CAAGCCAGTG
TTTGACAAGC ATCCGGCGCT TTTTGCTGAA TTAGGCGTAG ATGTTAACAA CGGTTTTGGT
GATGTTTATG CCAAAATAGC GACATTACCT GCCGATAGCC GCGCCGAAGT CGAAGCCGAT
ATCGCCGCCG TTTACGCTGC ACGTCCCGCA TTGGCTATGG TTGATTCTGA CAAAGGTATC
ACCAACTTAC ACGTGCCAAG CGACATCATT ATCGATGCGT CTATGCCTGC TGCGATTCGT
TCATCTGGCC AAATGTGGGG ACCAGATGGT CAACTGCATG ACACTAAAGC TATGATCCCA
GATCGTTGCT ATGCCGGTAT CTACCAAGAA ACGATTGCCT TCTGTAAAGA GCACGGCGCT
TTTGATCCTA AAACCATGGG CAGCGTGCCA AACGTGGGCT TGATGGCGCA AAAAGCCGAA
GAGTACGGCA GCCACGATAA GACCTTTGAA ATACCTGCTG ACGGTGTGGT CAACGTTGTC
GATGCAAGTG GTAAGGTATT GATGAGCCAT AACGTAGAAG CGGGCGATAT CTGGAGAATG
TGCCAAGTTA AAGACGCACC TATCCGTGAT TGGGTCAAAC TGGCCGTGCG CCGTGCCCGT
TTAAGCAATA CTCCTGCGGT ATTCTGGTTA GATAGCAAAC GTGCCCACGA TGCGCAAATC
ATTGCAAAAG TGCAGCAGTA TCTGCCAGAA CATGACACTG ATGGCTTAGA TATCAGCATC
ATGTCTCCAG AAGACGCGAC GCGTTTGTCT TTGGCTCGCA TCAAAGAAGG CAAAGATACC
ATTTCAGTTA CGGGTAACGT TTTACGTGAC TACCTGACTG ACTTGTTCCC CATCCTTGAG
CTAGGCACCA GTGCCAAAAT GCTGTCAATC GTTCCGTTAA TGAACGGCGG CGGTCTATTT
GAAACAGGTG CGGGCGGTAG TGCGCCTAAG CACGTGCAAC AGGTTGAGAA AGAAGGTCAC
TTACGTTGGG ATTCACTCGG TGAATTCTTG GCTCTGGCGG CGTCTCTTGA GCATTTAAGC
CAAACTGTCG GTAATCCAAA AGCCCAAGTG TTAGCTGATA CCTTAGATCA AGCCATTGGC
CAATTCTTAG ATAGCAACAA ATCGCCATCA AGAAGAGTCG GTGAGTTAGA CAACCGTGGC
AGCCATTTCT ACTTAGCCAT GTACTGGGCA CAAGCCTTAG CCGCGCAAAC GGGCGATGAG
CAGTTACAAG CTCACTTCAT TCCGTTAGCG CATGCGTTGG CGGCAAATGA GCAAGTGATT
GTGGCTGAAT TAGCGACGGC ACAAGGTGCA CCAGTCGATT TAGGCGGTTA CTACCGTTTA
GATGCGGCTA AGGCTGAAAA AGCCATGCGC CCAAGCGAGA CGTTAAACAA GCTGTTGATT
GCTTAA
 
Protein sequence
MKDNSSTIIY TETDEAPALA TLSLLPIIRT FTDAAGVAVE TRDISLSGRI IASFPEQLTE 
AQKIGDHLTE LGELANQPEA NIIKLPNISA SIPQLKACIL ELQQKGYNIP HYPDEPKTDA
EKSIKTRYDK IKGSAVNPVL REGNSDRRAP LSVKNFAKKN PHSMGKWATD SKSHVAHMTD
GDFYGSEQSV TLSDAGSVNI VLTQKDGQEV VLKSGLKLLA GEIIDAAVLS KKALVSFYER
EIENAKAEDV LLSLHLKATM MKVSDPIMFG HAVKVFFKPV FDKHPALFAE LGVDVNNGFG
DVYAKIATLP ADSRAEVEAD IAAVYAARPA LAMVDSDKGI TNLHVPSDII IDASMPAAIR
SSGQMWGPDG QLHDTKAMIP DRCYAGIYQE TIAFCKEHGA FDPKTMGSVP NVGLMAQKAE
EYGSHDKTFE IPADGVVNVV DASGKVLMSH NVEAGDIWRM CQVKDAPIRD WVKLAVRRAR
LSNTPAVFWL DSKRAHDAQI IAKVQQYLPE HDTDGLDISI MSPEDATRLS LARIKEGKDT
ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKEGH
LRWDSLGEFL ALAASLEHLS QTVGNPKAQV LADTLDQAIG QFLDSNKSPS RRVGELDNRG
SHFYLAMYWA QALAAQTGDE QLQAHFIPLA HALAANEQVI VAELATAQGA PVDLGGYYRL
DAAKAEKAMR PSETLNKLLI A