Gene Shew185_2452 details

Gene Information

• Locus tag: Shew185_2452
• Symbol: tmk
• ID: 5373481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 2928081
• End bp: 2928707
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640830665
• Product: thymidylate kinase
• Protein accession: YP_001366652
• Protein GI: 153000971
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0414256
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTT TTGCAAAATT TATCGTTATT GAAGGTTTAG AAGGCGCGGG TAAGTCGAGT 
GCGATTAACC TTATTCGCGA CTTTATTGAA AAACATACGG GTAAAGCGCC GATCTGCACC 
CGCGAGCCGG GTGGCACGCC ACTGGCCGAA CGTATCCGTG ATTTGGTCAA AATTGCCGAT 
GCGACCGATC CCCTGTGTGA CGAGGCCGAG TGTTTACTCA TCTATGCCGC CAGAGCCCAA 
TTGGTTGCCA ATGTCATTAA ACCTGCGCTT GCGCAGGGTC AATGGGTATT GGGTGACAGA 
CACAATTTAT CGTCACTGGC CTATCAAGGT GGTGGCAGGG GCTTAATGCC GTTAGTGGAA 
GCGGTGAGCA CTGCCACCCT AAAAGGCTTT AAACCCGATC TCACCTTGTA CTTAGATTTA 
GATCCTAAAC TTGGGCTAAC CCGCGCGGCT AAACGCGGTG AGCTTGATAG AATCGAGCAA 
CAAGCGATTG ATTTCTTTGA ACGAGCACGC GCTACATATC TCAAACTTGC CAGCGAAGAT 
GACAGCATAG TGGTTATCGA TGCGAGTCAA ACCATGGCCG AAGTGCATAA AGATATCTTA 
GCCGTGCTAC AGGCGATGGC ATGGTAG 

 

Protein sequence

MSVFAKFIVI EGLEGAGKSS AINLIRDFIE KHTGKAPICT REPGGTPLAE RIRDLVKIAD 
ATDPLCDEAE CLLIYAARAQ LVANVIKPAL AQGQWVLGDR HNLSSLAYQG GGRGLMPLVE 
AVSTATLKGF KPDLTLYLDL DPKLGLTRAA KRGELDRIEQ QAIDFFERAR ATYLKLASED 
DSIVVIDASQ TMAEVHKDIL AVLQAMAW