| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2426 |
|---|
| Symbol | |
|---|
| ID | 5369690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2890353 |
|---|
| End bp | 2891540 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640830639 |
|---|
| Product | aromatic amino acid transporter |
|---|
| Protein accession | YP_001366626 |
|---|
| Protein GI | 153000945 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.392601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGA ATAAAATTTT CGGCAGTTTG CTGCTTATCG CAGGCACCAC AATCGGCGCG
GGTATGCTGG CTTTGCCTAT CGCATCGGCG GGACTTGGTT TTGGCACGTC CTCCGCCATC
ATGTTGATCC TGTGGGCGCT AATGGCCTAC ACGGCACTGC TTATGGTGGA AATCCATCAA
TTCGCCCCCA GCGATGCCAG CCTTAATCAC TTGGCGCAGG GCTTATTGGG TCGTAAGGGC
CAGTTGATCG CCAATAGCGC CTTGATGTTT TTACTGTACG CCCTTTGCGC CGCCTACATT
GCCGGTGGTG GTGAGCAAGT GAACCAAAAG CTGACCACTT GGCTAGGGCT AAGTTTGCCA
CCGCAGGCGG GCGCCATCCT GTTTACCCTG CTGATTGGGG CGATTGTGGG CATGGGAACT
CACTGTGTGG ACCTTATCAA CCGCGGTTTG TTTGCCATTA AGCTATTGGC ATTACTGCTT
ATGTTGGCCT TGTTACTGCC GCAGGTAGAA AGCTCACATT TGCTCGAACT CCCACTCAAC
CAAGGCCTAA TTATCACGGC TATTCCGGTG ATTTTTACCT CCTTTGGTTT CCACGGTTCG
ATTCCATCAG TGGTGCGCTA CTTAGGCGTT GAGGTCAAAG CCCTGCGCAG GATCATGCTG
CTCGGCTCCG CTTTGCCTCT GGTCATTTAT CTTTTGTGGC AAGTAGGTAG CCAAGGTGTA
CTGAGCCAAA GCCAATTGCT CGAAAATCAG AGCTTATCGA GCTTTATCAA TCAACTGGCG
AGCGTACTGC ACAGCGAATA CTTAAGTAGT GCGATCAGTC TGTTTGCCGA TCTCGCTCTT
GCGACTTCGT TTTTAGGGGT GAGTTTAGGT TTGTTTGATT TTATGGCCTC AACCTTAAGA
CGAGAGGATA ATTTTTCTGG TCGTAGCCTA ACCGCTGCTA TCACCTTTTT ACCGCCCTTA
GGTTTTGCCC TCTTCTACCC CCAAGGTTTT ATCACAGCCC TAGGTTACGC GGCGATTGCG
CTGGTGATCC TCGCCATCTT TCTACCTGTG GCCATGGTGT GGAAACAGCG CCAGACGCGA
GATGCGGCCA ATATGCCGAC GGGATATCGG GTCGCGGGCG GCAAGTTTGC CTTAATGCTC
GCCACACTTT GCGGAATAGT GGTTATCGCC GCGCAGATGT TTAGCTAG
|
|---|
| Protein sequence | MTQNKIFGSL LLIAGTTIGA GMLALPIASA GLGFGTSSAI MLILWALMAY TALLMVEIHQ
FAPSDASLNH LAQGLLGRKG QLIANSALMF LLYALCAAYI AGGGEQVNQK LTTWLGLSLP
PQAGAILFTL LIGAIVGMGT HCVDLINRGL FAIKLLALLL MLALLLPQVE SSHLLELPLN
QGLIITAIPV IFTSFGFHGS IPSVVRYLGV EVKALRRIML LGSALPLVIY LLWQVGSQGV
LSQSQLLENQ SLSSFINQLA SVLHSEYLSS AISLFADLAL ATSFLGVSLG LFDFMASTLR
REDNFSGRSL TAAITFLPPL GFALFYPQGF ITALGYAAIA LVILAIFLPV AMVWKQRQTR
DAANMPTGYR VAGGKFALML ATLCGIVVIA AQMFS
|
|---|
| |