Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2399 |
Symbol | |
ID | 5369397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2856669 |
End bp | 2858369 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830613 |
Product | hypothetical protein |
Protein accession | YP_001366600 |
Protein GI | 153000919 |
COG category | [S] Function unknown |
COG ID | [COG2849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000014686 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAGTCT TATTACTATT ATCTGCGCTA CTTATGTCGT TTAATTTGTC GGCTGAGCGA ATTTTACTCG ACCAAGAATG GCGGCTTAGC GATGTGCCGG GCGAAGCCAT TTATTATCTG GAGCAAGCGC CGACAGAACA AAATGGCGAG TGGCCAGTGC AGCTATTTTA TTTAGAAACG GATAAACCGG TTTTTAAGGG CAGTGTCAAC AATCCCAATT TAGTCGAGAG TTTTATCGTT GGCGATTTCG AGTTTTTCTA CCCCGACGGT CAATTGTCTC GCAAGGGCAG CAGCGATGCG CAAGGACATT ATCAGGGCAC GCATCTGCAT TATTGGGAAG ACGGAGCGCT CTCGGGAGAG TACCACTACC AGAATGGCCA ACTGAACGGC GAGCAGAAAA GCTATTATCA AAATGGCCAA CTGCAGCGCC ATGAGCATCG CGTGAATGGG GCTGAATTAG GCTTATCGCA GAGTTATCAT GCCAACGGCC AGCTGGCATC GCGCGCAAAC TATGGTGCAA ACGGTATGGA AGGGCGATAT GAGAGCTTCT ATGACAATGG TAAGCCAGAG CAAAGCGTGA ATATGGTGGC GGGAAAATAC CAAGGTGAAC GACTGTTTTG GGCCAAAGAG GGCTGGTTAT ACACCAAAGA GTTTTACCTG AATGGAAAAA TGCACGGAGA AGTGTTGATT TATCAGGCCG CAGATATTCT GCAAGAGCTT AAACATTATC AGCATGGCAA GCAGGTGGGT TTACAGCAGC GTTTTAAAGG GCCAGGGCTG TTAGCCATGC AGCAAGAGTA CGATAATGCT GGCCGCGAAA TACAGAATAT TACCTATGAT AATGCTGGCA ATGTCGCCAC TCAAACCGAT ACTCAATATC TTGCAAAAGG CCGGATTAGC ACTGAACAGC GCTTCAATGG CACTGGAAAG TTAACCCATC AATATCAGCG TGATACTGCG AAAAACTGGA GTTTACGTCA GCGCTTCGAC TCAGCTGGTG AATTGATTGA ACGCGATGAA CAACTCAAGG GGCAATACGA TGGCTTGTAT ATTGGGATTG GCTGGAATGG CGCTGTCCAA CGTGCGAGCT ATAGCAAAGG TCAAATGCAC GGTGCCTATC GGGAAGATAA TGTAGAGGAC GGCAGTTTTG TCAGCGGCCA ATACCACTTA GGTTTAAAGG TCGGCAAGTG GGTCACGCAA ACCCGTGACA CGACGCGCAA TGAGCAGTTT AACCAACAAG GTCAGCTGAG TGGCGAACAA ACAGAAATCG CAGCCGATGG CACGATAATG CGCCGAGAAT TTTATAAAAA CGCTAAGTTA CATGGCGCGT ATTTACTGCG TGGCTTTGAT AAACAACTGC AAGCCCAAGG TCAGTATGTT AACGGTCAGC GCGAAGGCCA ATGGCTGCTG CAAGATGAAA GCAGCTACAG CATGGTTAAG CTCTGGCATG GTCACTATAA AGCAGGACAC GAAGTGGGTC ACTGGCAAGC CTTTTCCGCC AACGGCCATT TATTAGGGCA GACGCAATAT GATGATAAAG GTCAATTGCA GGGCAAAGGC TATAGTTTTA ACGAAGATGG CAGCCTGCTG CAAAGTGATG AGTATCTTGA TAATCAACTG CACGGCAGGT CGGTGTATTA CTTTAATGGC GAACCCTCAT CCGAGTATCG CTATCAAAAT GGTCAGATGA TCAGCGAGTA G
|
Protein sequence | MRVLLLLSAL LMSFNLSAER ILLDQEWRLS DVPGEAIYYL EQAPTEQNGE WPVQLFYLET DKPVFKGSVN NPNLVESFIV GDFEFFYPDG QLSRKGSSDA QGHYQGTHLH YWEDGALSGE YHYQNGQLNG EQKSYYQNGQ LQRHEHRVNG AELGLSQSYH ANGQLASRAN YGANGMEGRY ESFYDNGKPE QSVNMVAGKY QGERLFWAKE GWLYTKEFYL NGKMHGEVLI YQAADILQEL KHYQHGKQVG LQQRFKGPGL LAMQQEYDNA GREIQNITYD NAGNVATQTD TQYLAKGRIS TEQRFNGTGK LTHQYQRDTA KNWSLRQRFD SAGELIERDE QLKGQYDGLY IGIGWNGAVQ RASYSKGQMH GAYREDNVED GSFVSGQYHL GLKVGKWVTQ TRDTTRNEQF NQQGQLSGEQ TEIAADGTIM RREFYKNAKL HGAYLLRGFD KQLQAQGQYV NGQREGQWLL QDESSYSMVK LWHGHYKAGH EVGHWQAFSA NGHLLGQTQY DDKGQLQGKG YSFNEDGSLL QSDEYLDNQL HGRSVYYFNG EPSSEYRYQN GQMISE
|
| |