Gene Shew185_2382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2382 
SymbolhscA 
ID5370818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2838722 
End bp2840584 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content51% 
IMG OID640830596 
Productchaperone protein HscA 
Protein accessionYP_001366583 
Protein GI153000902 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR01991] Fe-S protein assembly chaperone HscA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000622111 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTTT TGCAGATAGC TGAGCCCGGT CAAAGTGCCG CGCCGCACCA ACATAGACTT 
GCCGTTGGCA TCGATTTAGG TACGACCAAT TCTTTGGTGG CGGCTGTTCG AAGTGGAGAG
ACGGCAACCC TGCCGGACGA ACTTGGACAG CATTCATTAC CTTCTATCGT GCGTTATACC
CAAGATTCAG TCGAAGTTGG CGCCCTTGCG GCGTTGAGTT CGGCGCAGGA TCCGCAAAAC
ACGATCGTTT CGGTTAAGCG TTTTATGGGC CGCAGCCTGG CTGATATCAA AGCCGGCGAG
CAATCATTCC CCTACGAGTT TGCCGAAAGC GAAAACGGTT TACCTTTATT CGTGACTCCC
CAAGGCCAAG TAAATCCCGT GCAAGTGTCT GCGGAGATTT TACGTCCGCT GATTGCCCGT
GCTGAAAAAA CCTTAGGTGG CGAGCTGCAA GGTGTCGTAA TAACCGTACC GGCCTATTTT
GATGATGCCC AGCGCCAAGG CACGAAAGAT GCCGCAGCTT TGCTGGGTGT TAAAGTGCTA
CGTCTGTTGA ATGAACCGAC GGCTGCTGCG ATTGCCTACG GCTTAGACTC TAAGCAAGAG
GGCGTAATTG CCATCTATGA CTTAGGCGGC GGCACCTTCG ATATTTCTAT TTTGCGCTTG
AATCGCGGCG TATTCGAAGT GTTAGCCACC GGCGGTGATT CTGCGCTTGG CGGCGATGAT
TTCGATCATT TACTCCAAGC ACATATGCAA CAAGTGTGGC AGCTTAGCGA CATCGACTCA
CAATTAAGCC GTCAACTGTT GATTGAATCG CGTCGAGTCA AAGAAGCCTT AACGGATGCA
GCAGAAACTG AAGCAAAAGT GATCCTTGCC GATGGGACTG AACTCACGCA AATCGTTTCT
AAAGCTGAAT TTGATGCCAT GATTGCGGCG TTGGTTAAGA AGACCATTGC TAGCTGTCGC
CGTACCCTGC GTGATGCGGG CGTGACGACA GATGAAGTGC TTGAAACTGT GATGGTTGGC
GGTTCAACGC GCGTGCCATT AGTGCGTGAA CAGGTTGAAG CTTTCTTCGG TAAACCACCA
CTGACGTCTA TCGATCCCGA CCGTGTTGTC GCGATTGGTG CGGCCATTCA AGCCGACATT
TTAGTGGGTA ATAAACCTGA ATCTGATTTG CTGCTCCTCG ATGTGATCCC TTTGTCATTA
GGCATAGAAA CCATGGGCGG CTTAGTGGAA AAAGTGGTGT CGCGTAATAC GACGATTCCG
GTTGCGCGAG CACAGGAATT TACCACCTTT AAAGATGGTC AAACGGCCAT GGCATTCCAT
GTGGTGCAGG GCGAGCGTGA ACTCGTTGCC GATTGCCGCT CACTGGCTCG TTTTACGCTA
AAAGGTATTC CGCCGTTAGC CGCAGGTGCG GCGCATATTC GTGTGACATT CCAAGTGGAT
GCCGATGGTT TACTCAGCGT GACCGCGATG GAGAAATCCA CCGGCGTGCA GTCAAGTATT
CAAGTTAAGC CATCTTTTGG TTTATCGGAT ACTGAAATTG CCACTATGCT GAAAGATTCG
ATGAAGTATG CCAAAGACGA TATCGGTCGT CGTATGCTGG CCGAGCAGCA AGTGGAGGCG
GCGAGGGTAC TCGAGTCTTT ACATGCCGCG TTAGCGAAAG ATGGCGACTT GCTGAATGCC
GATGAGCGTG GACAAATCGA TGCCACTATG GCCAATGTGG CGCAAGTTGC CGCGGGCGAT
GATGCCGATG CGATTAAGCT CGCGATTGAA AAACTGGATG AGCAAACCCA AGATTTTGCT
GCCAGACGTA TGGACAATTC TATTCGAGTG GCATTCAAAG GCCAGTCGAT CGACAACATA
TAG
 
Protein sequence
MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGE TATLPDELGQ HSLPSIVRYT 
QDSVEVGALA ALSSAQDPQN TIVSVKRFMG RSLADIKAGE QSFPYEFAES ENGLPLFVTP
QGQVNPVQVS AEILRPLIAR AEKTLGGELQ GVVITVPAYF DDAQRQGTKD AAALLGVKVL
RLLNEPTAAA IAYGLDSKQE GVIAIYDLGG GTFDISILRL NRGVFEVLAT GGDSALGGDD
FDHLLQAHMQ QVWQLSDIDS QLSRQLLIES RRVKEALTDA AETEAKVILA DGTELTQIVS
KAEFDAMIAA LVKKTIASCR RTLRDAGVTT DEVLETVMVG GSTRVPLVRE QVEAFFGKPP
LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVIPLSL GIETMGGLVE KVVSRNTTIP
VARAQEFTTF KDGQTAMAFH VVQGERELVA DCRSLARFTL KGIPPLAAGA AHIRVTFQVD
ADGLLSVTAM EKSTGVQSSI QVKPSFGLSD TEIATMLKDS MKYAKDDIGR RMLAEQQVEA
ARVLESLHAA LAKDGDLLNA DERGQIDATM ANVAQVAAGD DADAIKLAIE KLDEQTQDFA
ARRMDNSIRV AFKGQSIDNI