Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2382 |
Symbol | hscA |
ID | 5370818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2838722 |
End bp | 2840584 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640830596 |
Product | chaperone protein HscA |
Protein accession | YP_001366583 |
Protein GI | 153000902 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR01991] Fe-S protein assembly chaperone HscA |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000622111 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCTTT TGCAGATAGC TGAGCCCGGT CAAAGTGCCG CGCCGCACCA ACATAGACTT GCCGTTGGCA TCGATTTAGG TACGACCAAT TCTTTGGTGG CGGCTGTTCG AAGTGGAGAG ACGGCAACCC TGCCGGACGA ACTTGGACAG CATTCATTAC CTTCTATCGT GCGTTATACC CAAGATTCAG TCGAAGTTGG CGCCCTTGCG GCGTTGAGTT CGGCGCAGGA TCCGCAAAAC ACGATCGTTT CGGTTAAGCG TTTTATGGGC CGCAGCCTGG CTGATATCAA AGCCGGCGAG CAATCATTCC CCTACGAGTT TGCCGAAAGC GAAAACGGTT TACCTTTATT CGTGACTCCC CAAGGCCAAG TAAATCCCGT GCAAGTGTCT GCGGAGATTT TACGTCCGCT GATTGCCCGT GCTGAAAAAA CCTTAGGTGG CGAGCTGCAA GGTGTCGTAA TAACCGTACC GGCCTATTTT GATGATGCCC AGCGCCAAGG CACGAAAGAT GCCGCAGCTT TGCTGGGTGT TAAAGTGCTA CGTCTGTTGA ATGAACCGAC GGCTGCTGCG ATTGCCTACG GCTTAGACTC TAAGCAAGAG GGCGTAATTG CCATCTATGA CTTAGGCGGC GGCACCTTCG ATATTTCTAT TTTGCGCTTG AATCGCGGCG TATTCGAAGT GTTAGCCACC GGCGGTGATT CTGCGCTTGG CGGCGATGAT TTCGATCATT TACTCCAAGC ACATATGCAA CAAGTGTGGC AGCTTAGCGA CATCGACTCA CAATTAAGCC GTCAACTGTT GATTGAATCG CGTCGAGTCA AAGAAGCCTT AACGGATGCA GCAGAAACTG AAGCAAAAGT GATCCTTGCC GATGGGACTG AACTCACGCA AATCGTTTCT AAAGCTGAAT TTGATGCCAT GATTGCGGCG TTGGTTAAGA AGACCATTGC TAGCTGTCGC CGTACCCTGC GTGATGCGGG CGTGACGACA GATGAAGTGC TTGAAACTGT GATGGTTGGC GGTTCAACGC GCGTGCCATT AGTGCGTGAA CAGGTTGAAG CTTTCTTCGG TAAACCACCA CTGACGTCTA TCGATCCCGA CCGTGTTGTC GCGATTGGTG CGGCCATTCA AGCCGACATT TTAGTGGGTA ATAAACCTGA ATCTGATTTG CTGCTCCTCG ATGTGATCCC TTTGTCATTA GGCATAGAAA CCATGGGCGG CTTAGTGGAA AAAGTGGTGT CGCGTAATAC GACGATTCCG GTTGCGCGAG CACAGGAATT TACCACCTTT AAAGATGGTC AAACGGCCAT GGCATTCCAT GTGGTGCAGG GCGAGCGTGA ACTCGTTGCC GATTGCCGCT CACTGGCTCG TTTTACGCTA AAAGGTATTC CGCCGTTAGC CGCAGGTGCG GCGCATATTC GTGTGACATT CCAAGTGGAT GCCGATGGTT TACTCAGCGT GACCGCGATG GAGAAATCCA CCGGCGTGCA GTCAAGTATT CAAGTTAAGC CATCTTTTGG TTTATCGGAT ACTGAAATTG CCACTATGCT GAAAGATTCG ATGAAGTATG CCAAAGACGA TATCGGTCGT CGTATGCTGG CCGAGCAGCA AGTGGAGGCG GCGAGGGTAC TCGAGTCTTT ACATGCCGCG TTAGCGAAAG ATGGCGACTT GCTGAATGCC GATGAGCGTG GACAAATCGA TGCCACTATG GCCAATGTGG CGCAAGTTGC CGCGGGCGAT GATGCCGATG CGATTAAGCT CGCGATTGAA AAACTGGATG AGCAAACCCA AGATTTTGCT GCCAGACGTA TGGACAATTC TATTCGAGTG GCATTCAAAG GCCAGTCGAT CGACAACATA TAG
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Protein sequence | MALLQIAEPG QSAAPHQHRL AVGIDLGTTN SLVAAVRSGE TATLPDELGQ HSLPSIVRYT QDSVEVGALA ALSSAQDPQN TIVSVKRFMG RSLADIKAGE QSFPYEFAES ENGLPLFVTP QGQVNPVQVS AEILRPLIAR AEKTLGGELQ GVVITVPAYF DDAQRQGTKD AAALLGVKVL RLLNEPTAAA IAYGLDSKQE GVIAIYDLGG GTFDISILRL NRGVFEVLAT GGDSALGGDD FDHLLQAHMQ QVWQLSDIDS QLSRQLLIES RRVKEALTDA AETEAKVILA DGTELTQIVS KAEFDAMIAA LVKKTIASCR RTLRDAGVTT DEVLETVMVG GSTRVPLVRE QVEAFFGKPP LTSIDPDRVV AIGAAIQADI LVGNKPESDL LLLDVIPLSL GIETMGGLVE KVVSRNTTIP VARAQEFTTF KDGQTAMAFH VVQGERELVA DCRSLARFTL KGIPPLAAGA AHIRVTFQVD ADGLLSVTAM EKSTGVQSSI QVKPSFGLSD TEIATMLKDS MKYAKDDIGR RMLAEQQVEA ARVLESLHAA LAKDGDLLNA DERGQIDATM ANVAQVAAGD DADAIKLAIE KLDEQTQDFA ARRMDNSIRV AFKGQSIDNI
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