| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2344 |
|---|
| Symbol | |
|---|
| ID | 5371709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2799653 |
|---|
| End bp | 2800279 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640830558 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_001366545 |
|---|
| Protein GI | 153000864 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAT CAGCTGCTAA CACTTTGGTC GTGCTCGACT TTGAAACCAC GGGGCTGTCG
CCCAATCAAG GGGATCGCGC GATTGAAATC GGGGCTGTGC TGATTGAAGA CGGCGTGATC
ACCCAAAGAT TTTCTGAATT AATGAACCCA GGATTTAGAA TAAGTCGCTT TATCGAGGAC
TACACAGGGA TCAGCAATCA AATGCTCAGG GACGCGGCGC CCTGCAATGA AGTGATGGCG
CGTTTTGCGG ACTTTATCGC CGATCACAAT TTAGTTGCCC ACAATGCGGC GTTCGATCAA
CGCTTTTTAG ATGCGGAGTT TGCCCAAATT CGCCATCGTT ATCTTGGGCA ATTTGGCTGT
TCCTTGCTGG TGGCGAGACG TTTGTATCAA GCGGCACCCA ATCATCAGTT AGGTACTTTA
GTGCGCTATA AACAGTTACC AACCGATGGC ACTTTTCACC GCGCCTTAGC CGATGCCGAA
ATGACCGGCC ATTTGTGGCT GGCTATGCTG GCAGACCTTC AGCAAGAGTT TGGACTCTGC
TCACCGACCT TTGAGTTACT GCAAAAATTA GCCAAGAAAA CCAAAGCAGA GGTGCCAAAA
TTTTTGCGTC AATACGCAGG CAAGTGA
|
|---|
| Protein sequence | MPTSAANTLV VLDFETTGLS PNQGDRAIEI GAVLIEDGVI TQRFSELMNP GFRISRFIED
YTGISNQMLR DAAPCNEVMA RFADFIADHN LVAHNAAFDQ RFLDAEFAQI RHRYLGQFGC
SLLVARRLYQ AAPNHQLGTL VRYKQLPTDG TFHRALADAE MTGHLWLAML ADLQQEFGLC
SPTFELLQKL AKKTKAEVPK FLRQYAGK
|
|---|
| |