Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2306 |
Symbol | |
ID | 5370526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2750149 |
End bp | 2750895 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640830520 |
Product | hypothetical protein |
Protein accession | YP_001366507 |
Protein GI | 153000826 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00197948 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGGTC ACAGTAAATG GGCCAACATT AAGCACCGTA AAGCAGCTCA AGATGCTAAA CGCGGTAAAC TCTTTACTAA ATTCATTCGC GAATTAACCG TCGCAGCCCG TGAAGGCGGC TCAGATCCCG ATTCCAATCC ACGATTACGT GTCGCCATTG ATAAAGCCCT CGGCGGCAAT ATGACCCGCG ATACGGTTGA GCGTGCGATT AAACGCGGCG CCGGTGAATT AGAAGGCCAG CAACTCGAAA CCATTCTCTA TGAAGGTTAT GGCCCAGGCG GCACCGCTGT GATGGTCGAA ACCATGACGG ACAATCGTAA TCGGACTGTG AGCGGTGTGC GCAATGCGTT TAGTAAATCG GGCGGTAACT TAGGCACGGA TGGGTCGGTT TCTTATCTAT TCACTAAGCG TGGGGTGTTA TCCTATGCGC CGGGAACCGA TGAAGATGCA TTGATGGAAG CGGCGCTTGA AGCAGGCGCG GAAGATATTG TCAGCTATGA TGATGGCGCG ATTGACGTCT TCACCGATCC CGTTGATTTC TATACGGTGA AAGATGCACT CGATAAAGCC CATTTTGTGG CGGATAATGC CGAAATCGCG ATGATCGCCT CGACGAAAGC TGAGCTTGAT CTAGACACCG CCGAAAAATT TATGCGCCTT ATCGACACCC TTGAAGATCA TGACGATGTG CAAGAAGTGT ATCATAATGC GGAAATCTCC GATGACGTGA TGGCAAGCCT AGGTTAG
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Protein sequence | MAGHSKWANI KHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDPDSNPRLR VAIDKALGGN MTRDTVERAI KRGAGELEGQ QLETILYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFSKS GGNLGTDGSV SYLFTKRGVL SYAPGTDEDA LMEAALEAGA EDIVSYDDGA IDVFTDPVDF YTVKDALDKA HFVADNAEIA MIASTKAELD LDTAEKFMRL IDTLEDHDDV QEVYHNAEIS DDVMASLG
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