Gene Shew185_2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2287 
Symbol 
ID5372308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2725465 
End bp2728215 
Gene Length2751 bp 
Protein Length916 aa 
Translation table11 
GC content48% 
IMG OID640830501 
ProductDNA gyrase, A subunit 
Protein accessionYP_001366488 
Protein GI153000807 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.28458e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATC TGGCATCATC TATTTCGCCA ATTAATATCG AAGACGAACT AAAGAATTCG 
TACCTTGATT ACGCCATGAG CGTTATCGTG GGACGTGCAT TACCAGACGT GCGCGACGGC
TTAAAGCCGG TTCATCGCCG CGTTCTGTTT GCCATGAGTG AATTGAAGAA CGATTGGAAC
AAGCCTTACA AAAAATCTGC CCGTGTGGTC GGTGACGTCA TCGGTAAATA TCACCCTCAT
GGTGACTCTG CTGTTTATGA CACTATCGTC CGTATGGCCC AGCCATTCTC ACTGCGTTAC
ACCTTAGTAG ACGGCCAAGG TAACTTCGGT TCGGTCGACG GTGACTCCGC GGCGGCAATG
CGTTATACCG AAATCCGTAT GGATAAGTTA GCGCATCAAT TACTGGCCGA TCTTGAAAAA
GAGACGGTAG ATTTCGTCCC TAACTACGAC GGCACAGAAC TCATTCCAGC GGTATTACCT
ACACGCGTAC CTAACCTGTT AATTAACGGT TCATCGGGTA TTGCGGTAGG TATGGCAACC
AACATCCCAC CACACAACCT AACGGAAGTC GTGAAAGGCT GTTTGGCACT GATTGAAGAA
CCCTCACTGT CTATTGAACA GTTGATGGAA TATATTCCTG GTCCGGATTT CCCAACTGCG
GCAATTATCA ATGGCCGTAA AGGCATTATT GATGCCTATA AAACCGGCCG TGGCCGCGCG
ATCATGCGTG CACTGGCGGA TGTGGAAACC GAAGATAATG GCCGTGAACG CATTATCGTG
ACTGAAATCC CTTATCAAGT GAACAAAGCC CGTTTAATCG AGAAGATTGC CGAGCTGGTT
AAAGATAAAA AGCTTGAAGG GATCAGCGGT CTACGCGACG AGTCTGATAA AGACGGTATG
CGTATCGTTA TCGAAATTAA GCGCGGTGAA GTGGGCGAGG TGGTATTAAA CAACCTGTAT
GCTCAAACGC AAATGCAGTG TTCTTTCGGG ATTAACATGG TGGCCCTGAC CAATGGTCAG
CCTAAACTGT TTAATCTTAA AGAAATGCTC GAATGCTTTA TTCTGCATCG CCGTGAAGTC
GTGACGCGTC GTACCGTATT TGAACTGCGT AAAGCCCGTG AGCGCGCCCA TATTTTGGAA
GCGCTGGCGG TTGCACTGGC TAACATCGAC CCGATTATTG CACTGATCAA AGCCTCGCCA
ACGCCTGCGG ATGCCAAAGT TAAATTGGTT GAGCAAGGTT GGGAATTAGG CCACGTTCAA
GGCATGCTGG AAAAAGCGGG CGATGACGCC GCGCGTCCTG AGTGGTTAGA GCCACAATAC
GGTATTCGTG ACGGTCAATA TTTCCTGACT GAGCAACAAG CTCAGGCGAT TCTGGAACTG
CGTTTACACC GTTTAACCGG TCTTGAACAC GATAAGATCA TCGCCGAATA CGAAGAGCTG
CTCGAATTTA TCGCGGGTCT GCTGTTTATT CTGCGCAGTC CTGAGCGTTT GATGGAAGTG
ATCAAGGAAG AGTTAGTTCA AATCCTTGAT GAATACGGTG ATGCTCGTCG TACAGTCATC
AATGCTAACG AAGTCGATAT GAGTCTTGAA GACTTGATCA ACGAAGAAGA CGTTGTGGTG
ACACTGTCGC ACTTAGGCTA TGCCAAGTAT CAACCCTTGA CCGATTACCA AGCCCAGCGC
CGTGGTGGTA AAGGTAAAGC GGCAACTAAA GTAAAAGACG AAGATTTCGT TGAAAAACTG
TTAGTTGCCA ATACCCATGA CACTATTTTG TGCTTCTCTG ACTTTGGTAA GATGTACTGG
CTCAAAGTGT ATCAATTGCC ACTAGCGAGC CGTACGGCTC GTGGTCGTCC AATTGTTAAC
TTGCTGCCGT TATCCGATGG CGAGCGCATT ACTGCGATTC TACCAGTACG TGAATACGCG
GCTGACAAGT ACATCATCAT GGCGACCTCA CACGGTACTG TGAAGAAAAC CGCACTAACA
GCTTATAGCA ACCCACGTGC AAACGGCATT ATCGCCGTTA ACCTCAAAGA CGGTGACCAA
CTGATCGGTG TCGATATCAC TAACGGTGAT GACGAAATCA TGTTGTTCTC GAACGAAGGT
AAAGTTGTTC GCTTTGGTGA GAAAGTCCGT GATTCTGAAA CAGGCGAAGT GAAAACCGAT
CCTGAAACTG GTGAAGAAGT CTTGTCCTTA CGTCCTATGG GCCGTACTGC AACAGGCGTT
CGTGGTATCC GTTTAGAAGA AGGTCAAAAA GTTGTGTCGC TTATCGTACC CAAAGGCGAT
GGCGCGATTC TGACTGTGAC TGAAAACGGT TACGGTAAAC GGACTCAACT GTCTGAATAC
CCAGCGAAGA GCCGTGCGAC TAAAGGTGTG GTTTCTATCA AGGTGAGCGA ACGTAACGGC
GCGGTTGTTG GCGCAGTGCA AGTGGGTCTT AACGACGAAC TGATGCTCAT CAGTGATAAA
GGCACCTTAG TGCGTACACC TGCGGGCGGC GTGTCTATCA TTGGCCGTAA CACCCAAGGT
GTGACGATTA TTCGCACCGC GGGCGACGAG AAAGTGGTTG GCCTGCAACG TATCGACGAA
ATCCAAAGTG ATGAAGATGA AGTCGAGCTG GATGAAAACG GTTTACCGAT TGTTCCTGTC
ATTATCGAAG GCGAATTAGC CGACGAGGCT CTTGATGAAG AGCTGGATGA CGAAGAAGAG
TTGGACGAAG ATGAAGACGA GCTTGCTGAT GATGAGCAAG ACGAAGAGTA A
 
Protein sequence
MTDLASSISP INIEDELKNS YLDYAMSVIV GRALPDVRDG LKPVHRRVLF AMSELKNDWN 
KPYKKSARVV GDVIGKYHPH GDSAVYDTIV RMAQPFSLRY TLVDGQGNFG SVDGDSAAAM
RYTEIRMDKL AHQLLADLEK ETVDFVPNYD GTELIPAVLP TRVPNLLING SSGIAVGMAT
NIPPHNLTEV VKGCLALIEE PSLSIEQLME YIPGPDFPTA AIINGRKGII DAYKTGRGRA
IMRALADVET EDNGRERIIV TEIPYQVNKA RLIEKIAELV KDKKLEGISG LRDESDKDGM
RIVIEIKRGE VGEVVLNNLY AQTQMQCSFG INMVALTNGQ PKLFNLKEML ECFILHRREV
VTRRTVFELR KARERAHILE ALAVALANID PIIALIKASP TPADAKVKLV EQGWELGHVQ
GMLEKAGDDA ARPEWLEPQY GIRDGQYFLT EQQAQAILEL RLHRLTGLEH DKIIAEYEEL
LEFIAGLLFI LRSPERLMEV IKEELVQILD EYGDARRTVI NANEVDMSLE DLINEEDVVV
TLSHLGYAKY QPLTDYQAQR RGGKGKAATK VKDEDFVEKL LVANTHDTIL CFSDFGKMYW
LKVYQLPLAS RTARGRPIVN LLPLSDGERI TAILPVREYA ADKYIIMATS HGTVKKTALT
AYSNPRANGI IAVNLKDGDQ LIGVDITNGD DEIMLFSNEG KVVRFGEKVR DSETGEVKTD
PETGEEVLSL RPMGRTATGV RGIRLEEGQK VVSLIVPKGD GAILTVTENG YGKRTQLSEY
PAKSRATKGV VSIKVSERNG AVVGAVQVGL NDELMLISDK GTLVRTPAGG VSIIGRNTQG
VTIIRTAGDE KVVGLQRIDE IQSDEDEVEL DENGLPIVPV IIEGELADEA LDEELDDEEE
LDEDEDELAD DEQDEE