Gene Shew185_2279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2279 
SymbolrpsA 
ID5370189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2714547 
End bp2716214 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content44% 
IMG OID640830493 
Product30S ribosomal protein S1 
Protein accessionYP_001366480 
Protein GI153000799 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.33831e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAT CTTTTGCTGA TCTATTTGAA CAATCCCTTC AAACTCTGGA ATTCCGTCCA 
GGTTCTATCG TTCGTGGTAC TGTTGTATCA ATCAAAAACG GTATGGTACT GGTTGACGCG
GGTCTGAAGT CTGAAAGCCC AATCCCAGCT GAACAATTCA AAAACGCTCA AGGTGTTTTA
GAAATCGCTG TTGGTGATGA AGTTGACGTA GCTCTTGACT CTGTTGAAGA CGGCTTCGGT
GAGACTCAAC TGTCTCGCGA AAAAGCGAAA CGTCATGAAG CTTGGATCGT TCTGGAAAAA
GCTTATGAAG ATGCTGAAAC TGTAATCGGT ATCATCAATG GTAAAGTTAA AGGCGGTTTC
ACTGTTGAAT TAAACGGTAT CCGTGCCTTC TTACCAGGTT CTCTAGTTGA CGTGCGCCCA
GTTCGCGACA CCGCTCACTT AGAGTACAAA GAATTAGAAT TCAAAGTTAT CAAGCTAGAC
CAGAAGCGTA ACAACGTTGT TGTTTCTCGT CGTGCAGTTA TCGAATCAGA AAGCAGCGCT
GAGCGTGATG CACTGTTAGA AAACCTGCAA GAAGGTCAAG CAGTTAAGGG TATCGTTAAG
AACCTGACTG ACTACGGTGC ATTCGTAGAT TTAGGTGGTG TTGACGGTCT GCTACATATC
ACAGATATGG CGTGGAAACG TGTTAAACAT CCATCAGAAA TCGTCAATGT TGGCGATGAA
ATCAACGTTA AAGTACTGAA GTACGATCGT GAGCGCACTC GTGTGTCTCT AGGTCTGAAA
CAACTTGGCG AAGATCCATG GTTAGAAATC AGCAAACGCT ACCCAGAAAA CACACGTTTA
ACTGGTCGCG TTACTAACCT AACTGACTAC GGTTGCTTCG TAGAAATCGA AGAAGGCGTT
GAAGGTCTGG TTCACGTTTC TGAAATGGAT TGGACTAACA AGAACATTCA CCCATCTAAA
GTTGTTAACT TAGGTGATGA AGTTGAAGTT CTGGTTCTGG ACATCGATGA AGAGCGTCGT
CGTATTTCTC TTGGTCTGAA ACAATGTAAG ACCAATCCAT GGGATGACTT CGCAACTCGT
TACAACAAAG GCGACAAGGT TTCTGGTAAG ATCAAGTCAA TCACTGACTT CGGTATCTTT
ATCGGTCTTG ACGGCGGTAT CGATGGTCTA GTTCACCTGT CTGACATTTC TTGGAACGGT
ACTGGCGAAG ACGCAGTTTC TGAATACAAG AAAGGCGATG AAATCCATGC AGTGGTTCTG
TCTGTAGATC CAGAGCGTGA GCGCATCAGC TTAGGTGTTA AGCAAACTGA AGATGATCCA
TTCAACGCAT ACTTGGCTGA CAAGAAGAAA GGTACTATCG TAAACGGTAC TGTTTCTGCT
GTTGATGCTA AAGGTGTGAC TGTTGAACTG GCTGACACTG TTGAAGGTTA CATCCGTGTA
GCTGACATTT CACGTGAGCG TATCGAAGAT GCATCTACTG TCTATAATGT AGGTGATGCA
ATCGAAGCTA AGTTCATGGG TGTTGACCGT AAGAACCGCT CTATCAGCCT GTCAATCAAA
GCGAAAGACG AAGCTGAAGA GAAAGAAGTA ATGGCGACTC TGAACAAACA AGATGACGCT
GTTATTAGCA ATGCAATGGC TGAAGCGTTT AAAGCAGCTC GTAAATAA
 
Protein sequence
MTESFADLFE QSLQTLEFRP GSIVRGTVVS IKNGMVLVDA GLKSESPIPA EQFKNAQGVL 
EIAVGDEVDV ALDSVEDGFG ETQLSREKAK RHEAWIVLEK AYEDAETVIG IINGKVKGGF
TVELNGIRAF LPGSLVDVRP VRDTAHLEYK ELEFKVIKLD QKRNNVVVSR RAVIESESSA
ERDALLENLQ EGQAVKGIVK NLTDYGAFVD LGGVDGLLHI TDMAWKRVKH PSEIVNVGDE
INVKVLKYDR ERTRVSLGLK QLGEDPWLEI SKRYPENTRL TGRVTNLTDY GCFVEIEEGV
EGLVHVSEMD WTNKNIHPSK VVNLGDEVEV LVLDIDEERR RISLGLKQCK TNPWDDFATR
YNKGDKVSGK IKSITDFGIF IGLDGGIDGL VHLSDISWNG TGEDAVSEYK KGDEIHAVVL
SVDPERERIS LGVKQTEDDP FNAYLADKKK GTIVNGTVSA VDAKGVTVEL ADTVEGYIRV
ADISRERIED ASTVYNVGDA IEAKFMGVDR KNRSISLSIK AKDEAEEKEV MATLNKQDDA
VISNAMAEAF KAARK