Gene Shew185_2276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2276 
Symbol 
ID5370534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp2712626 
End bp2713786 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content47% 
IMG OID640830490 
Producttetratricopeptide repeat protein 
Protein accessionYP_001366477 
Protein GI153000796 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2956] Predicted N-acetylglucosaminyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000000000164995 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAGA TACTCTTTCT GTTGCTTCCC ATTGCTGCCG CCTACGGTTG GTATATGGGG 
CGACGGAGCA TAAGACAGAA TCAAAGCAAT CAACGTAAAC AATTGAGCCG GGATTATTTT 
ACTGGCCTCA ATTTCTTACT GTCGAACGAA TCGGATAAAG CGGTTGATTT GTTTATCAGT 
ATGCTAGATG TTGACGATGA AACCATAGAT ACCCATCTGT CACTTGGTTC GTTGTTCCGC 
AAGCGAGGCG AGGTCGACCG CTCCATTCGT ATCCATCAGA ATTTAATTGC CCGTCCAAAC 
CTAGCCAATG AGCAGCGCGA TATCGCTATG ATGGAGCTGG GTAAAGATTA TCTGGCCGCA 
GGATTTTACG ATAGGGCCGA AGAAATCTTT ATCAACTTGG TTAGCCAAGA CGATCACAGT 
GAAGAGTCAG AAACTCAGCT CATTGCTATC TATCAAGTGA TTAAAGAGTG GCAAAAAGCC 
ATTGATATCA CTAAGCGTCT AAGTCGTAAA CGTCAGCAAG TCTTAAAGCC GTTAACGGCG 
CATTTCTATT GCCAGTTAGC CGATGAAGCC TGCGATGATG CACAGAAAAT TAAACTGCTG 
CAACAAGCGC TGAAGCAAGA TCCGCAATGC GGACGTGCGT TATTGACCTT AGCGAAAAAA 
TTCCTCGATA TTCAAGATTA TGCCCAGTGC AAGCAAATGC TGCTGCAACT GAAAAAAGCC 
GATATCGAGC TTTTTGCCGA TGCAATCCCC ACGGCCAAAC AAGTTTATCG CGACACACAA 
GACAAAGAAG GCTTCCAAGA GTTACTGGCG GGCGCCATGG CCGATGGCGC GGGTGCTTCT 
GTAGTTGTCG CCTTAGCGCA GCACATGATA AGTCTGGATG AGATTAAAGC GGCAGAGACC 
ATGGTGCTCG ATGCCCTATA TCGGCATCCG ACCATGAAAG GTTTTCAGCA CTTGATGCAA 
ATGCATTTGC GTCAAGCAGA GGAAGGGCAA GCCAAGCAAA GTTTAACTAT GCTAGAGCAG 
CTCGTTGAGC AACAAATTAA ATTCCGTCCA AGCTACCGTT GTAAAGAGTG TGGTTTCCCT 
TCCCATGCAC TTTACTGGCA TTGTCCTTCC TGTAAAAACT GGGGCAGTAT CAAGCGGATC 
AGAGGCTTAG ACGGCGAGTA A
 
Protein sequence
MLEILFLLLP IAAAYGWYMG RRSIRQNQSN QRKQLSRDYF TGLNFLLSNE SDKAVDLFIS 
MLDVDDETID THLSLGSLFR KRGEVDRSIR IHQNLIARPN LANEQRDIAM MELGKDYLAA 
GFYDRAEEIF INLVSQDDHS EESETQLIAI YQVIKEWQKA IDITKRLSRK RQQVLKPLTA 
HFYCQLADEA CDDAQKIKLL QQALKQDPQC GRALLTLAKK FLDIQDYAQC KQMLLQLKKA 
DIELFADAIP TAKQVYRDTQ DKEGFQELLA GAMADGAGAS VVVALAQHMI SLDEIKAAET 
MVLDALYRHP TMKGFQHLMQ MHLRQAEEGQ AKQSLTMLEQ LVEQQIKFRP SYRCKECGFP 
SHALYWHCPS CKNWGSIKRI RGLDGE