Gene Shew185_2272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2272 
Symbol 
ID5370247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2708298 
End bp2710055 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content48% 
IMG OID640830486 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001366473 
Protein GI153000792 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.31801e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTT ATCAAGCCCC GTTAACGGAT ATGCGTTTCC TACTGGAACA GGTATTTGAT 
GCCCCAAACA CTTGGGCACA ATTGCCTGAG ATTGCTGAAA TGGTCGATAT CGACACGGCC
AATGCCATTC TTGAAGAAGC AGCCAAGATC AGCAGTGAGT TGATCCATCC GCTGAACCGG
ACGGGCGATG AGCAGGGCGT GTTACATCAA GATAATCAAG TGATTACTCC TGATGGCTAC
AAAGCCGTTT ATGAACAGTA TTCGCAGGGC GGTTGGATTG GCTTGTGTGG TGATCCTGAA
TTTGGTGGCA TGGGCATGCC AAAGATGCTG GGGATCTTAG TCGACGAAAT GGCTTACAGT
GCCTGTAATG CGTTTACGCT TTATGGCTCG TTAACTGCGG GGGCGGCTTT ATGTATCAAT
GCCCACGGCA GCGAAGCATT AAAACAAGCT TATTTGCCTA AGTTATATTC CGGCGAATGG
GCGGGTGCTA TGGATATGAC AGAGCCGCAA GCGGGTTCTG ATCTGCGTAA TATTCGCACT
CGAGCTTTAC CGCAGGATGA TGGTAGTTAT GCCATTACGG GCAGCAAGAT TTTCATTACG
GGTGGCGATC ACGATTTAAC TGAAAACGTC ATCCACTTAG TGCTTGCCAA GCTACCGGAT
AGCAAAGGGA TTTCACTCTT CCTAGTGCCT AAAATATCGG TAAATACCGA TGGCAGCTTA
GCGAATGCGA ATGGTGTATC AGTCGGTTCT ATCGAGCACA AGATGGGCCT TAAAGGTTCA
GCAACGTGTG TGATGAACTT TGATAATGCA CAAGGTTTCT TGATTGGTGA ACCCAATCGC
GGTCTCGTAT GCATGTTCAC TATGATGAAC TACGAGCGTT TAGCGATTGG TATACAAGGT
CTGGGCAGTG CTCAGGCGGC GTATCAGATG GCAGCTGATT ATGCTAAAGA GCGTAATCAA
GGCGTTGCCG CTGGCGGCTC GCCGACGGGC AGTGAATCTG ATCCTATTAT CGTCCACGGC
GATGTGCGCC GTATGTTGTT GACCATTCGA GCGATGACAG AAGCGGGCCG TGCTTTGTCT
GTATTTACTG GGCAACAGCT AGATTTGGCC AAATATGCTC AAGATGAAGT TAAAGCCAAA
GCAGCGCGTT ATGTGGGTTT ATTAACGCCA GTCGCTAAAG CCTTTTTAAC CGATCGCGGT
CTTGATGCGA CGATCATGGC GCAGCAAGTT TTTGGTGGAC ATGGTTATAT TCGTGAAACG
GGTATTGAGC AATTAGTTCG TGATACCCGT ATCGCACAGA TTTATGAAGG CACAAATGGC
ATTCAAGCCA TCGATTTCCT CGGCCGTAAA GTCACGGGCG ATAATCTTGC CGCATTAAAC
GAATTTGTCG CTGACTTGAA AGCACAAATG CGCGCATTTA CTCACGTTGA TGCGGTGAAA
GTGGCCGCAG TATGCGCACG TTTAGATGCC TTGGTCATAG TCGCTGAGTC GATTAATGAG
CACAAAGTCG CTCAGCCTGC GCTTATTAAT GCTTGCGCGG TCGACTTTTT AGATGCCTTT
GGTTATACCC TTTATGGTTT CTACTGGTTG GCTATGGTCG ATAAAGTCGC TGATCATGAA
GATAAAGCTT TCGCCGAGCA GAAAGCCTAT TTAGCTAAGT TCTATTTTGA TAAGTTACTG
CCTAAAGCGG ATTACCATAT CGCTCAAGTC AGAGCCGGTG ATGCGACCAC TATGGCGATG
CCTGCAGAGT TGTTTTAA
 
Protein sequence
MNPYQAPLTD MRFLLEQVFD APNTWAQLPE IAEMVDIDTA NAILEEAAKI SSELIHPLNR 
TGDEQGVLHQ DNQVITPDGY KAVYEQYSQG GWIGLCGDPE FGGMGMPKML GILVDEMAYS
ACNAFTLYGS LTAGAALCIN AHGSEALKQA YLPKLYSGEW AGAMDMTEPQ AGSDLRNIRT
RALPQDDGSY AITGSKIFIT GGDHDLTENV IHLVLAKLPD SKGISLFLVP KISVNTDGSL
ANANGVSVGS IEHKMGLKGS ATCVMNFDNA QGFLIGEPNR GLVCMFTMMN YERLAIGIQG
LGSAQAAYQM AADYAKERNQ GVAAGGSPTG SESDPIIVHG DVRRMLLTIR AMTEAGRALS
VFTGQQLDLA KYAQDEVKAK AARYVGLLTP VAKAFLTDRG LDATIMAQQV FGGHGYIRET
GIEQLVRDTR IAQIYEGTNG IQAIDFLGRK VTGDNLAALN EFVADLKAQM RAFTHVDAVK
VAAVCARLDA LVIVAESINE HKVAQPALIN ACAVDFLDAF GYTLYGFYWL AMVDKVADHE
DKAFAEQKAY LAKFYFDKLL PKADYHIAQV RAGDATTMAM PAELF