| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2243 |
|---|
| Symbol | |
|---|
| ID | 5370029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2670596 |
|---|
| End bp | 2671216 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640830457 |
|---|
| Product | chemoreceptor glutamine deamidase CheD |
|---|
| Protein accession | YP_001366444 |
|---|
| Protein GI | 153000763 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.030336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTAAAAC CTAATATCGA ATATGCCATT TCAGAGCCTA ATCGTTATCA TGACCACCAT
TTTGGTTGCG ATGCAGTGAA GATCTTGCCA GGCGAGTATT TTGCCACCCG TGAAGATACC
ATGATAGTGA CAGTGTTAGG CTCCTGTGTG TCCGTGTGTT TGTATGATCC TAAGCTCAAA
ATCGGCGGAA TGAATCATTT CTTATTGCCA AGCGATAACA GCAATTGCAC AGGGGTGCTT
GCCGACTCAG CCCGTTACGG TGTATATGCA ATGGAGCTAT TAATCAACGA CTTGCTCAAG
CTTGGCGCGC AGCGTAATTC ACTCGAAGCT AAGGTGTTTG GTGGCGGCAA CATGTTGCGT
AGTTTTACTG TACACAATAT TGGTGAGCGT AATGCGGAGT TTGTGATTGA ATACCTCAAT
CTTGAAAATA TCCCTATCAT TGCGGCCGAT TTACTCGATG TGTATCCACG TAAGGTGTAT
TTCTTTCCCC ATACGGGCAA AGTGAAAGTG CGCAAAATTA AGACCATGCA CAACAGCACC
ATTCTTGACC GGGAAAGTGA ATACCGCTTA CGGGTTCGTA ATCTCCCCAC GGGCGGCGAC
GTTGAACTAT TTGGTGATTA A
|
|---|
| Protein sequence | MLKPNIEYAI SEPNRYHDHH FGCDAVKILP GEYFATREDT MIVTVLGSCV SVCLYDPKLK
IGGMNHFLLP SDNSNCTGVL ADSARYGVYA MELLINDLLK LGAQRNSLEA KVFGGGNMLR
SFTVHNIGER NAEFVIEYLN LENIPIIAAD LLDVYPRKVY FFPHTGKVKV RKIKTMHNST
ILDRESEYRL RVRNLPTGGD VELFGD
|
|---|
| |