Gene Shew185_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2205 
Symbol 
ID5372345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2632393 
End bp2633052 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content45% 
IMG OID640830418 
Producthypothetical protein 
Protein accessionYP_001366407 
Protein GI153000726 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.21186e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAG AAACCTTATA TTCGACAAGT GCGTCAACAC TGGAAGTGAA CAAACTTCTT 
AAAAACACTT ATATGCTGTT GTCTATGACA TTGGCCTTCT CTGCCCTGTG CGCTGGCTTG
GCAATGGCAT TAAATATCAG TCCATTACTC TCCATTGGCT TATCCATTGG TGGCCTAGTG
CTGTTGTTTG TGACCTTACG TAAAGCCGAG TCTGCAGCGG GTATCTTCTG GGTATTTGCC
TTTACTGGTA TGGAAGGCGC GTCACTGGGC TACATGTTAA ATCACTATGC AGGCATGGCA
AACGGTCCAC AGCTGATCAT GCAAGCACTG GGGTTAACGT CAGTGATTTT CGTTGCCTTA
TCAGCCTATG CGGTGACCAC TAAGAAAGAT TTCTCTTTCC TACGTGGGTT CTTGTTCGCT
GGCTTGATTG TGGTGATTGC CGCTGCCGTA ATTAACATCT TTATGGGTAA TAGCATTGCC
TTTATGGCGA TTAACGCTGG TATTGCATTA TTGATGACAG GTTTTATCCT GTTTGATACT
AGCCGAATTG TGAACGGTGG CGAGACGAAT TACATTCGCG CGACTATCTC ATTATACTTA
GATTTCTTAA ACCTCTTCAT CGCGCTGTTG CACCTAATGG GCATAGGCAA CGATGACTAA
 
Protein sequence
MTQETLYSTS ASTLEVNKLL KNTYMLLSMT LAFSALCAGL AMALNISPLL SIGLSIGGLV 
LLFVTLRKAE SAAGIFWVFA FTGMEGASLG YMLNHYAGMA NGPQLIMQAL GLTSVIFVAL
SAYAVTTKKD FSFLRGFLFA GLIVVIAAAV INIFMGNSIA FMAINAGIAL LMTGFILFDT
SRIVNGGETN YIRATISLYL DFLNLFIALL HLMGIGNDD