| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2166 |
|---|
| Symbol | |
|---|
| ID | 5372203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2583594 |
|---|
| End bp | 2584073 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640830381 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001366371 |
|---|
| Protein GI | 153000690 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3198] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000514786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAC AACAAGCCTG GTATAAGCAG TTCTGGCCTT GGTTTTTAAT TATTCTTCCT
TTATGTGCCG TCGTCGCAAG TTTTACCACA CTAAAAATTG CCCTTACGAA CTCGGATTCT
TTAGTCGCCG AGGATTACTA CAAAGATGGC AAAGCCATTA ATATGGACTT AAGTAAAGTA
AAGTATGCCA AACAAATAGG CATGAATTTT TTACTCGAAC AAACTAATAA TGAAATTCTG
CTGACGCAAC AAGGTGGTCC CGCTTCTCAA GCTGCGCTGA AAGTCGAGTT CTACCATCCA
ACCATTGCCG ACAGAGACAT CAAGCTCACC GCTACAGCCG ATGCCAGTAA TGTGTATCGC
ATTACCGTGC CTGCCACCCT GATCGGCCCT TGGGAAGTGC GTCTGGAAAG TTACGATGGC
AAATGGCGCA TTCACCAACG CGTTGAATTA AAAGATCATG TCCAACTTTG GCTGAACTGA
|
|---|
| Protein sequence | MSEQQAWYKQ FWPWFLIILP LCAVVASFTT LKIALTNSDS LVAEDYYKDG KAINMDLSKV
KYAKQIGMNF LLEQTNNEIL LTQQGGPASQ AALKVEFYHP TIADRDIKLT ATADASNVYR
ITVPATLIGP WEVRLESYDG KWRIHQRVEL KDHVQLWLN
|
|---|
| |