Gene Shew185_2140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2140 
Symbol 
ID5370323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2554799 
End bp2555977 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content45% 
IMG OID640830352 
Producthypothetical protein 
Protein accessionYP_001366345 
Protein GI153000664 
COG category[S] Function unknown 
COG ID[COG4394] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.6162e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA CACCCCGCTG CACTCATTGG GATATCTTTT GTACCGTGGT CGATAACTAT 
GGCGATATTG GCGTCACTTG GCGTTTAGCC AAACAAATGG CTAATGAGTA CCAGATTCCC
GTTAATTTGT GGGTCGACGA CCTCGCAAGC TTCTCGCACA TATTACCGAC ACTCGATCCA
CTAAAAACCG CTCAAAGCTT CAATGGTGTG AATATTATTC ATTGGACTAA GCCTTTACCC
TTAGCGTTTG TCGCAGGAGC TGTGCTCATC GAAGCCTTTG CCTGTGAATT ACCCGAACAG
GTAAAAGAAC AGTTAGTTTA TTTACATCAG AACGACCCCA GATCTGTGCC TATCTGGTTG
AATTTAGAAT ATTTAAGCGC TGAGGATTGG GTCGAAGGCT GCCATGGTTT GCCTTCATTA
CAAGCCAATG GTCTAAAGAA GTATTTTTAC TTCCCGGGCT TTGGCGCAAA AACCGGTGGG
CTCATCTGCG AGCAAGATTT GTTTGCCGAG CGCGATGCTT GGCAAGCTAA CTCAGCTAAC
AAATTACAGC TTTTTAGTCA GCTAGGTATT AAGGGGATTG AGGCTCAAGA TACTGTGATT
AGCATCTTTA GCTACGAGAC CGAGGCACTG CCGGCGTTAT GCGAGTTATG GCAGCAATCG
GCCGAGAAAA TCCATGCGTT GATCCCCAAG GGGCGCAGCT TAAACAGTCT GACGCAGTTA
CTGCCCTGTG ATATTGCCAC TCTTGTGCCG GGTCAGCAGA TAAATCATGG CAATTTAACC
CTGCATATTT TACCCATGAC AGACCAACAG GGGTTTGATC GTCTGCTCTG GAGCTGCGAT
TTTAATATCG TCCGCGGTGA AGATTCCTTT TTACGCGCTC AATGGGCCGC AAAACCCTTC
ATTTGGCATA TTTATCCCCA AGAAGATGAT TATCACCTCG TAAAATTAGA AGCTTTTCTC
AAACTTTACT GCGATAATCT GCCACCTAAA ATTGCTTGTT ATTGGTCTGA ATTGAATCTT
GCGTTCAACC AAGCACAGCA ATCTGCCGTG AGCCTTCACT GGCAAAACCT TAATCCTGTT
AATTTGCCCT TGTTGCACCA TGCTAAACAA TGGCCAATTA ATGCATTAAA TGCTGCAGAT
CTCGCTACTC GACTAGTTCA GTTCGTTAAA AACAGCTAA
 
Protein sequence
MTNTPRCTHW DIFCTVVDNY GDIGVTWRLA KQMANEYQIP VNLWVDDLAS FSHILPTLDP 
LKTAQSFNGV NIIHWTKPLP LAFVAGAVLI EAFACELPEQ VKEQLVYLHQ NDPRSVPIWL
NLEYLSAEDW VEGCHGLPSL QANGLKKYFY FPGFGAKTGG LICEQDLFAE RDAWQANSAN
KLQLFSQLGI KGIEAQDTVI SIFSYETEAL PALCELWQQS AEKIHALIPK GRSLNSLTQL
LPCDIATLVP GQQINHGNLT LHILPMTDQQ GFDRLLWSCD FNIVRGEDSF LRAQWAAKPF
IWHIYPQEDD YHLVKLEAFL KLYCDNLPPK IACYWSELNL AFNQAQQSAV SLHWQNLNPV
NLPLLHHAKQ WPINALNAAD LATRLVQFVK NS