Gene Shew185_2139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2139 
Symbol 
ID5369525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2554193 
End bp2554753 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content43% 
IMG OID640830351 
Productelongation factor P 
Protein accessionYP_001366344 
Protein GI153000663 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.80024e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAAT CCGTCCTGGT AACGTGATCA TGTTAGATGG CAGCCCATGG 
GTTGTGCAGA AAACTGAAAC AACTCGTTCT GGCCGTAACG CTGCTATCGT TAAGTTAAAG
TTGAAAAACT TACTGCTTAA CTCTGGTACT GAAACGACTT TCAAAGGTGA AGATAAGTTA
GAAGACATCA TCCTAGATCG TCTTGATTGT ACTTATTCTT ACTTTGCTGA TCCTATGTTT
GTATTCATGG ATGCAGAATA TAACCAATAC GACGTAGAAG CTGAAAACTT AGGTGATGCA
GCGGCTTATA TCGTTGACGG TATGGAAGAA ACTTGCCAAG TGACTTTCTA CGATGGCAAA
GCTATCTCTG TTGAAATGCC AACCACTATC GTACGTGAAG TGATCTACAC TGAGCCTTCA
GCTCGTGGCG ATACTTCAGG TAAAGTGATG AAGCCAGCAA CTATCACTGG CGGCGGCACT
GTTACTGTTG CTGACTTCGT GAAAGTTGGC GACAAGATTG AAATCGATAC TCGTACTGGC
GAATTCAAGA AGCGCGTTTA A
 
Protein sequence
MKTAHEIRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKLK LKNLLLNSGT ETTFKGEDKL 
EDIILDRLDC TYSYFADPMF VFMDAEYNQY DVEAENLGDA AAYIVDGMEE TCQVTFYDGK
AISVEMPTTI VREVIYTEPS ARGDTSGKVM KPATITGGGT VTVADFVKVG DKIEIDTRTG
EFKKRV