Gene Shew185_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2127 
Symbol 
ID5369528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2536562 
End bp2538841 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content48% 
IMG OID640830339 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001366332 
Protein GI153000651 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00720758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGACGA TTATAATTCT TGCCCTGATA GCCATTGTCG TGTTGTTTGC GGTGAAAAAT 
ATCCGGATGC AGTTTATTAC CCGCCCAGTT TTTAGTTTTT TCAAGAAGGT CTTGCCGCCA
CTTTCAGATA CCGAGCGCGA AGCGATGGAA GCCGGTGATG TCTGGTGGGA AGGGGAGTTA
TTCCGCGGAA ATCCTAACTG GAATACCTTG CACAGCTACG GTAAACCGAC ACTGAGCGCT
GAAGAAAAAG ACTTTATCGA TAATCAAGTA ATGACAGCAC TGACGATGAT CGATGATTTC
GACATAGTGC ATAACCGTAA AGATTTACCG CCAGAGTTGT GGGAATACTT CAAGAAAGAA
GGTTTCTTCG CCCTGATCAT TCCGAAGAAA TTCGGTGGTA AAGCTTTCTC TGCCTATGCT
AACTCTACCA TTGTCAGCAA ATTAGCCAGC CGCAGCGTAA GCGCCGCAGT GACCGTAATG
GTGCCGAACT CTTTAGGCCC TGGTGAGTTG TTGACCCATT ATGGTACGAG TGAGCAGAAA
GAACGTTGGT TACCTGCTTT GGCTAAAGGC GATGAAATTC CTTGTTTTGC GTTAACTGGT
CCAGAAGCGG GCAGTGATGC CGGCGCTATA CCTGATGTGG GTATTGTGTG CCGTGATACC
TTCAATGGCG AAGAGATGCT CGGGCTAAAA CTGACTTGGG ATAAGCGTTA TATCACGCTG
GCGCCTGTAG CGACGGTTCT GGGTTTAGCC TTCCAAATGC GCGATCCAGA AGGTCTGCTT
GGTGATAAGA AAAACTTAGG CATTACCTGT GCGTTGATCC CAACGGATCA TCCTGGTGTG
GTTATTGGTC GTCGTCATAA TCCGCTAGGT ATGGCGTTTA TGAACGGTAC CACCCAAGGT
AAAGAAGTGT TTATCCCGCT GGATTGGATT ATCGGTGGCC CTGAATTTGC TGGTAAAGGC
TGGCGTATGC TGGTTGAGTG TTTGTCGGCG GGCCGCGGTA TTTCATTACC TGCACTGGCA
ACGGCTTCTG GTCACATGGC GACGAAGACG ACAACGGCTT ACAGCTATGT GCGTCATCAG
TTTGGTATGG CGATTGGCCA GTTTGAAGGT GTGCAAGAAG CGCTGGCACG TATTATTGCC
AACACTTATC AGTTAGAAGC CGCACGCCGT TTAACGACTA CGGGTATCGA TCTTAAGGTG
AAACCTTCGG TTGTGACTGC GATTGCTAAG TACCATATGA CTGAATTAGG CCGTTCTGTG
ATGAACGATG CGATGGATAT TCAATCAGGT AAGGGCATTC AATTAGGACC TAAAAACTAT
TTAGGCCACC CTTATATGTC GAATCCAATT TCGATCACTG TGGAAGGCGC GAACATTCTA
ACCCGCTCCT TGATGATTTT TGGTCAAGGT GCGACTCGCT GCCATCCTTA CGTGCTTGCC
GAAATGGAAG CCGCAGCGAT GGAGAACCAA CATGAAGCCT TAGAGCGTTT TGATGCGCTA
TTAATGGGCC ACATGGGTTA TGCCACGCGT AATGCTTTCA GTGCGTTGTT TAGTGCCTTA
AGTGGTAGCC GTTTTGGCAG TGCGCCAGTG AGCGGTGAAA CTAAGCAGTA CTATAAAGAT
ATGTCGCGTA TTTCATCTGC ATTAGCCTTA ATGACGGATT TATCAATGCT GATCATGGGC
GGCGATTTAA AACGCAAAGA AATGCTGTCG GCACGTATGG GTGATGTGCT CAGCCAGTTG
TATTTAGGCT CAGCAACCTT GAAGCTATTT GAAGACAATG GCCGTCAACA GGACGATTTA
CCAGCAGTAC GTTACGTAAT GGCCAATCGT TTGCACTTAG CGGCTAAAGC ACTGGAAGAC
ACGATCCGTA ACTTCCCGAG CCGTCCTGTG GCATGGTTAC TGCGCGGCTT AATCTTCCCG
CTGGGTAATC ACTTCAATGC GCCGAGCGAC AAAATGGCGA CCGATTTAGT CGGCGGCATG
TTGAAGCCTG GACCTGCTCG TGACCGTATT ACCTTCCTAT GTCCTGAATT TGAAGGAGAT
AAAGGCGGTA TTGCAGAAGT TGAGCAAGCG TTTGTTGCGC AATATGCCTG TAAAGATATT
TATAAAAAGC TGAAGAAAGC GCAGCGTGCC GGTGAACTGC CAGCCAAAGT GCCTAATCTC
GTCTTGTTTG CAAAAGCACT CGAGACAGGT GTTATTACTG CTGATGAAGA GCAAAAATTG
CAGCATGCTG ATAAGCTGCG CTTAGCGGCA ATTAATGTGA ATGATTTCGA AGCGTTATAA
 
Protein sequence
MLTIIILALI AIVVLFAVKN IRMQFITRPV FSFFKKVLPP LSDTEREAME AGDVWWEGEL 
FRGNPNWNTL HSYGKPTLSA EEKDFIDNQV MTALTMIDDF DIVHNRKDLP PELWEYFKKE
GFFALIIPKK FGGKAFSAYA NSTIVSKLAS RSVSAAVTVM VPNSLGPGEL LTHYGTSEQK
ERWLPALAKG DEIPCFALTG PEAGSDAGAI PDVGIVCRDT FNGEEMLGLK LTWDKRYITL
APVATVLGLA FQMRDPEGLL GDKKNLGITC ALIPTDHPGV VIGRRHNPLG MAFMNGTTQG
KEVFIPLDWI IGGPEFAGKG WRMLVECLSA GRGISLPALA TASGHMATKT TTAYSYVRHQ
FGMAIGQFEG VQEALARIIA NTYQLEAARR LTTTGIDLKV KPSVVTAIAK YHMTELGRSV
MNDAMDIQSG KGIQLGPKNY LGHPYMSNPI SITVEGANIL TRSLMIFGQG ATRCHPYVLA
EMEAAAMENQ HEALERFDAL LMGHMGYATR NAFSALFSAL SGSRFGSAPV SGETKQYYKD
MSRISSALAL MTDLSMLIMG GDLKRKEMLS ARMGDVLSQL YLGSATLKLF EDNGRQQDDL
PAVRYVMANR LHLAAKALED TIRNFPSRPV AWLLRGLIFP LGNHFNAPSD KMATDLVGGM
LKPGPARDRI TFLCPEFEGD KGGIAEVEQA FVAQYACKDI YKKLKKAQRA GELPAKVPNL
VLFAKALETG VITADEEQKL QHADKLRLAA INVNDFEAL