Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_2127 |
Symbol | |
ID | 5369528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2536562 |
End bp | 2538841 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830339 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_001366332 |
Protein GI | 153000651 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00720758 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGACGA TTATAATTCT TGCCCTGATA GCCATTGTCG TGTTGTTTGC GGTGAAAAAT ATCCGGATGC AGTTTATTAC CCGCCCAGTT TTTAGTTTTT TCAAGAAGGT CTTGCCGCCA CTTTCAGATA CCGAGCGCGA AGCGATGGAA GCCGGTGATG TCTGGTGGGA AGGGGAGTTA TTCCGCGGAA ATCCTAACTG GAATACCTTG CACAGCTACG GTAAACCGAC ACTGAGCGCT GAAGAAAAAG ACTTTATCGA TAATCAAGTA ATGACAGCAC TGACGATGAT CGATGATTTC GACATAGTGC ATAACCGTAA AGATTTACCG CCAGAGTTGT GGGAATACTT CAAGAAAGAA GGTTTCTTCG CCCTGATCAT TCCGAAGAAA TTCGGTGGTA AAGCTTTCTC TGCCTATGCT AACTCTACCA TTGTCAGCAA ATTAGCCAGC CGCAGCGTAA GCGCCGCAGT GACCGTAATG GTGCCGAACT CTTTAGGCCC TGGTGAGTTG TTGACCCATT ATGGTACGAG TGAGCAGAAA GAACGTTGGT TACCTGCTTT GGCTAAAGGC GATGAAATTC CTTGTTTTGC GTTAACTGGT CCAGAAGCGG GCAGTGATGC CGGCGCTATA CCTGATGTGG GTATTGTGTG CCGTGATACC TTCAATGGCG AAGAGATGCT CGGGCTAAAA CTGACTTGGG ATAAGCGTTA TATCACGCTG GCGCCTGTAG CGACGGTTCT GGGTTTAGCC TTCCAAATGC GCGATCCAGA AGGTCTGCTT GGTGATAAGA AAAACTTAGG CATTACCTGT GCGTTGATCC CAACGGATCA TCCTGGTGTG GTTATTGGTC GTCGTCATAA TCCGCTAGGT ATGGCGTTTA TGAACGGTAC CACCCAAGGT AAAGAAGTGT TTATCCCGCT GGATTGGATT ATCGGTGGCC CTGAATTTGC TGGTAAAGGC TGGCGTATGC TGGTTGAGTG TTTGTCGGCG GGCCGCGGTA TTTCATTACC TGCACTGGCA ACGGCTTCTG GTCACATGGC GACGAAGACG ACAACGGCTT ACAGCTATGT GCGTCATCAG TTTGGTATGG CGATTGGCCA GTTTGAAGGT GTGCAAGAAG CGCTGGCACG TATTATTGCC AACACTTATC AGTTAGAAGC CGCACGCCGT TTAACGACTA CGGGTATCGA TCTTAAGGTG AAACCTTCGG TTGTGACTGC GATTGCTAAG TACCATATGA CTGAATTAGG CCGTTCTGTG ATGAACGATG CGATGGATAT TCAATCAGGT AAGGGCATTC AATTAGGACC TAAAAACTAT TTAGGCCACC CTTATATGTC GAATCCAATT TCGATCACTG TGGAAGGCGC GAACATTCTA ACCCGCTCCT TGATGATTTT TGGTCAAGGT GCGACTCGCT GCCATCCTTA CGTGCTTGCC GAAATGGAAG CCGCAGCGAT GGAGAACCAA CATGAAGCCT TAGAGCGTTT TGATGCGCTA TTAATGGGCC ACATGGGTTA TGCCACGCGT AATGCTTTCA GTGCGTTGTT TAGTGCCTTA AGTGGTAGCC GTTTTGGCAG TGCGCCAGTG AGCGGTGAAA CTAAGCAGTA CTATAAAGAT ATGTCGCGTA TTTCATCTGC ATTAGCCTTA ATGACGGATT TATCAATGCT GATCATGGGC GGCGATTTAA AACGCAAAGA AATGCTGTCG GCACGTATGG GTGATGTGCT CAGCCAGTTG TATTTAGGCT CAGCAACCTT GAAGCTATTT GAAGACAATG GCCGTCAACA GGACGATTTA CCAGCAGTAC GTTACGTAAT GGCCAATCGT TTGCACTTAG CGGCTAAAGC ACTGGAAGAC ACGATCCGTA ACTTCCCGAG CCGTCCTGTG GCATGGTTAC TGCGCGGCTT AATCTTCCCG CTGGGTAATC ACTTCAATGC GCCGAGCGAC AAAATGGCGA CCGATTTAGT CGGCGGCATG TTGAAGCCTG GACCTGCTCG TGACCGTATT ACCTTCCTAT GTCCTGAATT TGAAGGAGAT AAAGGCGGTA TTGCAGAAGT TGAGCAAGCG TTTGTTGCGC AATATGCCTG TAAAGATATT TATAAAAAGC TGAAGAAAGC GCAGCGTGCC GGTGAACTGC CAGCCAAAGT GCCTAATCTC GTCTTGTTTG CAAAAGCACT CGAGACAGGT GTTATTACTG CTGATGAAGA GCAAAAATTG CAGCATGCTG ATAAGCTGCG CTTAGCGGCA ATTAATGTGA ATGATTTCGA AGCGTTATAA
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Protein sequence | MLTIIILALI AIVVLFAVKN IRMQFITRPV FSFFKKVLPP LSDTEREAME AGDVWWEGEL FRGNPNWNTL HSYGKPTLSA EEKDFIDNQV MTALTMIDDF DIVHNRKDLP PELWEYFKKE GFFALIIPKK FGGKAFSAYA NSTIVSKLAS RSVSAAVTVM VPNSLGPGEL LTHYGTSEQK ERWLPALAKG DEIPCFALTG PEAGSDAGAI PDVGIVCRDT FNGEEMLGLK LTWDKRYITL APVATVLGLA FQMRDPEGLL GDKKNLGITC ALIPTDHPGV VIGRRHNPLG MAFMNGTTQG KEVFIPLDWI IGGPEFAGKG WRMLVECLSA GRGISLPALA TASGHMATKT TTAYSYVRHQ FGMAIGQFEG VQEALARIIA NTYQLEAARR LTTTGIDLKV KPSVVTAIAK YHMTELGRSV MNDAMDIQSG KGIQLGPKNY LGHPYMSNPI SITVEGANIL TRSLMIFGQG ATRCHPYVLA EMEAAAMENQ HEALERFDAL LMGHMGYATR NAFSALFSAL SGSRFGSAPV SGETKQYYKD MSRISSALAL MTDLSMLIMG GDLKRKEMLS ARMGDVLSQL YLGSATLKLF EDNGRQQDDL PAVRYVMANR LHLAAKALED TIRNFPSRPV AWLLRGLIFP LGNHFNAPSD KMATDLVGGM LKPGPARDRI TFLCPEFEGD KGGIAEVEQA FVAQYACKDI YKKLKKAQRA GELPAKVPNL VLFAKALETG VITADEEQKL QHADKLRLAA INVNDFEAL
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